RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MAP7Q14244 749 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 GBP7Q8N8V2 638 aaPredicted RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 GSDMBQ8TAX9 411 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 FBXO2Q9UK22 296 aaPredicted RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 NBPF26B4DH59 902 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 GPC4O75487 556 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 NR3C1P04150 777 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 NBPF10Q6P3W6 841 aaKnown RBP14.82□□□□□ -0.04
RTN4-202ENST00000337526 TRIM42Q8IWZ5 723 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 NBPF15Q8N660 670 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 CDHR1Q96JP9 859 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 RFC1P35251 1148 aaPredicted RBP14.82□□□□□ -0.04
RTN4-202ENST00000337526 BBS9Q3SYG4 887 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 RNF169Q8NCN4 708 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 POLD4Q9HCU8 107 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 DIP2BQ9P265 1576 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 GSTA1P08263 222 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 GSTA2P09210 222 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 ALCAMQ13740 583 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 TMED8Q6PL24 325 aaPredicted RBP14.82□□□□□ -0.04
RTN4-202ENST00000337526 TBC1D1Q86TI0 1168 aaPredicted RBP14.82□□□□□ -0.04
RTN4-202ENST00000337526 COG1Q8WTW3 980 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 RAD54LQ92698 747 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 IL25Q9H293 177 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 Q9H521 79 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 VCX3AQ9NNX9 186 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 HAUS2Q9NVX0 235 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 USH1CQ9Y6N9 552 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 A2ML1A8K2U0 1454 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 NCK2O43639 380 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 SNAP25P60880 206 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 COASYQ13057 564 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 TFDP1Q14186 410 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 PDIK1LQ8N165 341 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 CELF1Q92879 486 aaKnown RBP14.82□□□□□ -0.04
RTN4-202ENST00000337526 CEP95Q96GE4 821 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 ANKRD36BP1Q96IX9 119 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 DDX47Q9H0S4 455 aaKnown RBP14.82□□□□□ -0.04
RTN4-202ENST00000337526 TXLNGQ9NUQ3 528 aa14.82□□□□□ -0.04
RTN4-202ENST00000337526 CD58P19256 250 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 PEX3P56589 373 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 VSNL1P62760 191 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 MTERF2Q49AM1 385 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 LAMC1P11047 1609 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 MMEP08473 750 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 TBC1D9BQ66K14 1250 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 SESTD1Q86VW0 696 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 IFT122Q9HBG6 1241 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 DIS3Q9Y2L1 958 aaKnown RBP14.81□□□□□ -0.04
RTN4-202ENST00000337526 GLI2P10070 1586 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 PALLDQ8WX93 1383 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 WDR91A4D1P6 747 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 ATP1A1P05023 1023 aaKnown RBP14.81□□□□□ -0.04
RTN4-202ENST00000337526 EIF2AK2P19525 551 aaKnown RBP14.81□□□□□ -0.04
RTN4-202ENST00000337526 PCDHA6Q9UN73 950 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 BCS1LQ9Y276 419 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 PCDHA8Q9Y5H6 950 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 POTEB3A0JP26 581 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 ZNF233A6NK53 670 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 POTECB2RU33 542 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 CPP00450 1065 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 POTEBQ6S5H4 581 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 TMEM179Q6ZVK1 233 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 CERKQ8TCT0 537 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 COA1Q9GZY4 146 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 CAPN11Q9UMQ6 739 aa14.81□□□□□ -0.04
RTN4-202ENST00000337526 SYNGAP1Q96PV0 1343 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ZRANB2O95218 330 aaKnown RBP eCLIP14.8□□□□□ -0.04
RTN4-202ENST00000337526 SEMA3FQ13275 785 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 SPATA4Q8NEY3 305 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 CHP1Q99653 195 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 A0A1B0GTH6 734 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 K7ERI5 159 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ZWINTO95229 277 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 FMR1Q06787 632 aaKnown RBP eCLIP14.8□□□□□ -0.045e-11■□□□□ 8.4
RTN4-202ENST00000337526 GRM4Q14833 912 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 DARS2Q6PI48 645 aaKnown RBP14.8□□□□□ -0.04
RTN4-202ENST00000337526 MMS22LQ6ZRQ5 1243 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 PYROXD1Q8WU10 500 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 TMEM260Q9NX78 707 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ZNF609O15014 1411 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ACTN1P12814 892 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 MAGOHP61326 146 aaKnown RBP14.8□□□□□ -0.04
RTN4-202ENST00000337526 CRB1P82279 1406 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 KNOP1Q1ED39 458 aaKnown RBP14.8□□□□□ -0.04
RTN4-202ENST00000337526 GADL1Q6ZQY3 521 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 CCNYQ8ND76 341 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ANAPC7Q9UJX3 599 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
RTN4-202ENST00000337526 GH2P01242 217 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 FCER1AP12319 257 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ECE1P42892 770 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 GCLMP48507 274 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 MMEL1Q495T6 779 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 ZNF449Q6P9G9 518 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 CENPUQ71F23 418 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 SMYD2Q9NRG4 433 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms