RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 GTF2IRD1Q9UHL9 959 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 FBXO2Q9UK22 296 aaPredicted RBP17.24■□□□□ 0.35
SEC13-201ENST00000337354 ZNF862O60290 1169 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 EVI5O60447 810 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 SMIM10L2AP0DMW4 78 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 SMIM10L2BP0DMW5 78 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 MARK3P27448 753 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 FAM47CQ5HY64 1035 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 OTUD6AQ7L8S5 288 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 BANK1Q8NDB2 785 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 LXNQ9BS40 222 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 HDAC6Q9UBN7 1215 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 TRPC6Q9Y210 931 aa17.23■□□□□ 0.35
SEC13-201ENST00000337354 C17orf102A2RUQ5 167 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 TLR3O15455 904 aaKnown RBP17.22■□□□□ 0.35
SEC13-201ENST00000337354 OATP04181 439 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 NCLP19338 710 aaKnown RBP17.22■□□□□ 0.35
SEC13-201ENST00000337354 HOXC8P31273 242 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 UBA7P41226 1012 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 CYP4A11Q02928 519 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 ZNF484Q5JVG2 852 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 C7orf61Q8IZ16 206 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
SEC13-201ENST00000337354 SPATA32Q96LK8 384 aa17.22■□□□□ 0.35
SEC13-201ENST00000337354 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
SEC13-201ENST00000337354 INSRRP14616 1297 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 CCT6AP40227 531 aaKnown RBP17.21■□□□□ 0.35
SEC13-201ENST00000337354 PRKCEQ02156 737 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 PPFIA1Q13136 1202 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 CTTNQ14247 550 aaKnown RBP17.21■□□□□ 0.35
SEC13-201ENST00000337354 UGCGQ16739 394 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 LRRC26Q2I0M4 334 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 FAM126BQ8IXS8 530 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 NACC1Q96RE7 527 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 CSRNP2Q9H175 543 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 SETD4Q9NVD3 440 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
SEC13-201ENST00000337354 COL1A2P08123 1366 aa17.21■□□□□ 0.34
SEC13-201ENST00000337354 DDX11L8A8MPP1 907 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 CUTAO60888 179 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 MED24O75448 989 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 STBD1O95210 358 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 CD4P01730 458 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 YWHABP31946 246 aaKnown RBP17.2■□□□□ 0.34
SEC13-201ENST00000337354 RTP1P59025 263 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 ADAM17P78536 824 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 TLE2Q04725 743 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 GRIN1Q05586 938 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 TRIM60Q495X7 471 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 HYIQ5T013 277 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 LEO1Q8WVC0 666 aaPredicted RBP17.2■□□□□ 0.34
SEC13-201ENST00000337354 CCSER1Q9C0I3 900 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 ANKEF1Q9NU02 776 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 WRAP73Q9P2S5 460 aaPredicted RBP17.2■□□□□ 0.34
SEC13-201ENST00000337354 NR2E3Q9Y5X4 410 aa17.2■□□□□ 0.34
SEC13-201ENST00000337354 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 RPLP2P05387 115 aaKnown RBP17.19■□□□□ 0.34
SEC13-201ENST00000337354 CDC25AP30304 524 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 TXLNAP40222 546 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 ME1P48163 572 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 GRIK4Q16099 956 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 PTGISQ16647 500 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 GDF6Q6KF10 455 aaPredicted RBP17.19■□□□□ 0.34
SEC13-201ENST00000337354 ANO5Q75V66 913 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 CABP7Q86V35 215 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 EXOC8Q8IYI6 725 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 CALML4Q96GE6 196 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
SEC13-201ENST00000337354 NOD1Q9Y239 953 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 ATP11BQ9Y2G3 1177 aa17.19■□□□□ 0.34
SEC13-201ENST00000337354 MBLAC1A4D2B0 266 aaPredicted RBP17.18■□□□□ 0.34
SEC13-201ENST00000337354 PP2D1A8MPX8 630 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 MAGEB2O15479 319 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 B4GALT4O60513 344 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 PQBP1O60828 265 aaKnown RBP17.18■□□□□ 0.34
SEC13-201ENST00000337354 TARBP2Q15633 366 aaKnown RBP17.18■□□□□ 0.34
SEC13-201ENST00000337354 TRMT1LQ7Z2T5 733 aaKnown RBP17.18■□□□□ 0.34
SEC13-201ENST00000337354 LMBR1Q8WVP7 490 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 CDK5RAP3Q96JB5 506 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 SEPT9Q9UHD8 586 aaPredicted RBP17.18■□□□□ 0.34
SEC13-201ENST00000337354 DBR1Q9UK59 544 aaKnown RBP17.18■□□□□ 0.34
SEC13-201ENST00000337354 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 DNM3Q9UQ16 869 aa17.18■□□□□ 0.34
SEC13-201ENST00000337354 H0YGN5 161 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 FAAP100Q0VG06 881 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 PTK7Q13308 1070 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 CSPP1Q1MSJ5 1256 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 MARCH8Q5T0T0 291 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
SEC13-201ENST00000337354 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
SEC13-201ENST00000337354 TAF2Q6P1X5 1199 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms