RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 ZNF302Q9NR11 478 aa20.15■□□□□ 0.82
CMTM1-204ENST00000336328 CDY2AQ9Y6F7 541 aa20.15■□□□□ 0.82
CMTM1-204ENST00000336328 CHD7Q9P2D1 2997 aa20.15■□□□□ 0.82
CMTM1-204ENST00000336328 DDX39AO00148 427 aaKnown RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 ENPP3O14638 875 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 CPLX1O14810 134 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 USP11P51784 963 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 CCT2P78371 535 aaKnown RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 SSRP1Q08945 709 aaKnown RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 LPIN1Q14693 890 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 ZNF484Q5JVG2 852 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 ODR4Q5SWX8 454 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 ZNF746Q6NUN9 644 aaPredicted RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 PDXDC2PQ6P474 469 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 FAM177A1Q8N128 213 aaPredicted RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 FAM49AQ9H0Q0 323 aaPredicted RBP20.14■□□□□ 0.81
CMTM1-204ENST00000336328 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
CMTM1-204ENST00000336328 COL1A2P08123 1366 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 IGLV3-22A0A075B6J6 115 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 DHX15O43143 795 aaKnown RBP20.13■□□□□ 0.81
CMTM1-204ENST00000336328 CIITAP33076 1130 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 KRT76Q01546 638 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 MTHFD1LQ6UB35 978 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 FIBCD1Q8N539 461 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 ADAMTS19Q8TE59 1207 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 ATP8B4Q8TF62 1192 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 CELF4Q9BZC1 486 aaKnown RBP20.13■□□□□ 0.81
CMTM1-204ENST00000336328 OSBPL7Q9BZF2 842 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 RNF216Q9NWF9 866 aaPredicted RBP20.13■□□□□ 0.81
CMTM1-204ENST00000336328 TRPV2Q9Y5S1 764 aa20.13■□□□□ 0.81
CMTM1-204ENST00000336328 TRANK1O15050 2925 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 EIF5BO60841 1220 aaKnown RBP20.12■□□□□ 0.81
CMTM1-204ENST00000336328 CCNE2O96020 404 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 PSAPP07602 524 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 KLRC1P26715 233 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 NLRP5P59047 1200 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 EPC2Q52LR7 807 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 KRT40Q6A162 431 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 SWSAP1Q6NVH7 229 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 SPRED2Q7Z698 418 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 GDPD5Q8WTR4 605 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 UHRF1Q96T88 793 aaPredicted RBP20.12■□□□□ 0.81
CMTM1-204ENST00000336328 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 PCDHA10Q9Y5I2 948 aa20.12■□□□□ 0.81
CMTM1-204ENST00000336328 MYH9P35579 1960 aaKnown RBP20.12■□□□□ 0.81
CMTM1-204ENST00000336328 KDM3AQ9Y4C1 1321 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 H3BNC9 293 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 RB1P06400 928 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 BMP1P13497 986 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 PRR16Q569H4 304 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 GALNT17Q6IS24 598 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 BBXQ8WY36 941 aaPredicted RBP20.11■□□□□ 0.81
CMTM1-204ENST00000336328 MRPL38Q96DV4 380 aaKnown RBP20.11■□□□□ 0.81
CMTM1-204ENST00000336328 CEP131Q9UPN4 1083 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 SIP14410 1827 aa20.11■□□□□ 0.81
CMTM1-204ENST00000336328 DEXIO95424 95 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 STAG3L1P0CL83 205 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 GPM6BQ13491 265 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 TOB2Q14106 344 aaPredicted RBP20.1■□□□□ 0.81
CMTM1-204ENST00000336328 ZNF710Q8N1W2 664 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 NCOA5Q9HCD5 579 aaKnown RBP20.1■□□□□ 0.81
CMTM1-204ENST00000336328 PDRG1Q9NUG6 133 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 VPS54Q9P1Q0 977 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 SAMM50Q9Y512 469 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 MAFBQ9Y5Q3 323 aaPredicted RBP20.1■□□□□ 0.81
CMTM1-204ENST00000336328 TTC3P53804 2025 aa20.1■□□□□ 0.81
CMTM1-204ENST00000336328 MAGEB2O15479 319 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 CD52P31358 61 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 TFF2Q03403 129 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 PAK2Q13177 524 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 CCDC60Q8IWA6 550 aaPredicted RBP20.09■□□□□ 0.81
CMTM1-204ENST00000336328 TRAPPC12Q8WVT3 735 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 FAM167AQ96KS9 214 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 RIT2Q99578 217 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 NRBP2Q9NSY0 501 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 PADI3Q9ULW8 664 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 PCDHA4Q9UN74 947 aa20.09■□□□□ 0.81
CMTM1-204ENST00000336328 IGSF9BQ9UPX0 1349 aa20.08■□□□□ 0.81
CMTM1-204ENST00000336328 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
CMTM1-204ENST00000336328 CDKL5O76039 1030 aa20.08■□□□□ 0.81
CMTM1-204ENST00000336328 TIGD5Q53EQ6 642 aa20.08■□□□□ 0.81
CMTM1-204ENST00000336328 AGO3Q9H9G7 860 aaKnown RBP20.08■□□□□ 0.81
CMTM1-204ENST00000336328 EVPLQ92817 2033 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 XBP1P17861 261 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 TMOD1P28289 359 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 SFNP31947 248 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 BMPR1AP36894 532 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 TMEM62Q0P6H9 643 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 BTG3Q14201 252 aaPredicted RBP20.07■□□□□ 0.8
CMTM1-204ENST00000336328 NPAS4Q8IUM7 802 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 KIAA0319LQ8IZA0 1049 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 RASGRP4Q8TDF6 673 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 C11orf84Q9BUA3 381 aaPredicted RBP20.07■□□□□ 0.8
CMTM1-204ENST00000336328 LMAN2LQ9H0V9 348 aa20.07■□□□□ 0.8
CMTM1-204ENST00000336328 GABBR1Q9UBS5 961 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms