RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 CTDP1Q9Y5B0 961 aaPredicted RBP18.36■□□□□ 0.53
TMEM39B-201ENST00000336294 RCCD1A6NED2 376 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 SLC16A3O15427 465 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 AKR1B10O60218 316 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 DCAF15Q66K64 600 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 SAMD7Q7Z3H4 446 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 CPXCR1Q8N123 301 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 PURBQ96QR8 312 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 IFIH1Q9BYX4 1025 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 LACRTQ9GZZ8 138 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 PARVGQ9HBI0 331 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 METTL14Q9HCE5 456 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 RAVER2Q9HCJ3 691 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 PUF60Q9UHX1 559 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 CNOT7Q9UIV1 285 aaKnown RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 ODF2LQ9ULJ1 636 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 PPP1R9AQ9ULJ8 1098 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 TFR2Q9UP52 801 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 BCS1LQ9Y276 419 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 PCDHA13Q9Y5I0 950 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 ASTN1O14525 1302 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 UBE4BO95155 1302 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 ZNF263O14978 683 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 FLOT1O75955 427 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 NOL4O94818 638 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 NR3C1P04150 777 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 ITGB5P18084 799 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 KCNH2Q12809 1159 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 SFMBT2Q5VUG0 894 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 STXBP4Q6ZWJ1 553 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 TXLNBQ8N3L3 684 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 LXNQ9BS40 222 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 GJA3Q9Y6H8 435 aa18.35■□□□□ 0.53
TMEM39B-201ENST00000336294 ZBED4O75132 1171 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 VCAM1P19320 739 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 MTMR2Q13614 643 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 TRAPPC11Q7Z392 1133 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 SECISBP2LQ93073 1101 aaKnown RBP18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 NLRC4Q9NPP4 1024 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 KCNH7Q9NS40 1196 aa18.34■□□□□ 0.53
TMEM39B-201ENST00000336294 LOXHD1Q8IVV2 1947 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 ASTN2O75129 1339 aaPredicted RBP18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 ANO9A1A5B4 782 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 CTAGE15A4D2H0 777 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 SFI1A8K8P3 1242 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 POTEB2H3BUK9 544 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 FZD9O00144 591 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 SERPING1P05155 500 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 CTAGE8P0CG41 777 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 FDX1P10109 184 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 ZNF131P52739 623 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 R3HDM1Q15032 1099 aaKnown RBP18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 NFIL3Q16649 462 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 SLC9C1Q4G0N8 1177 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 MIER3Q7Z3K6 550 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 CTAGE6Q86UF2 777 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 CTAGE4Q8IX94 777 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 SYTL5Q8TDW5 730 aaPredicted RBP18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 CRACR2AQ9BSW2 395 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 WRAP73Q9P2S5 460 aaPredicted RBP18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 UBIAD1Q9Y5Z9 338 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 FHOD1Q9Y613 1164 aa18.33■□□□□ 0.53
TMEM39B-201ENST00000336294 ARHGEF35A5YM69 484 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 ZBTB39O15060 712 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 PNMA6AP0CW24 399 aaPredicted RBP18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 XRCC5P13010 732 aaKnown RBP18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 GUCY2CP25092 1073 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 RASSF7Q02833 373 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 DGKZQ13574 1117 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 NBPF12Q5TAG4 269 aaPredicted RBP18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 BANK1Q8NDB2 785 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 IL31RAQ8NI17 732 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 AS3MTQ9HBK9 375 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 AGO4Q9HCK5 861 aaKnown RBP18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 POLD4Q9HCU8 107 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 JADE2Q9NQC1 790 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 HOMER2Q9NSB8 354 aa18.33■□□□□ 0.52
TMEM39B-201ENST00000336294 DOCK1Q14185 1865 aa18.32■□□□□ 0.52
TMEM39B-201ENST00000336294 DDX39AO00148 427 aaKnown RBP18.32■□□□□ 0.52
TMEM39B-201ENST00000336294 AKAP3O75969 853 aa18.32■□□□□ 0.52
TMEM39B-201ENST00000336294 NMT1P30419 496 aaKnown RBP18.32■□□□□ 0.52
TMEM39B-201ENST00000336294 ASTE1Q2TB18 679 aaPredicted RBP18.32■□□□□ 0.52
TMEM39B-201ENST00000336294 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
TMEM39B-201ENST00000336294 HGSNATQ68CP4 663 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms