RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 EMSYQ7Z589 1322 aa24.04■■□□□ 1.44
TPM1-204ENST00000334895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.03■■□□□ 1.44
TPM1-204ENST00000334895 CTAGE5O15320 804 aa24.03■■□□□ 1.44
TPM1-204ENST00000334895 PRR29P0C7W0 189 aa24.03■■□□□ 1.44
TPM1-204ENST00000334895 AFMP43652 599 aa24.03■■□□□ 1.44
TPM1-204ENST00000334895 ELOA2Q8IYF1 753 aaPredicted RBP24.03■■□□□ 1.44
TPM1-204ENST00000334895 KCTD17Q8N5Z5 321 aa24.03■■□□□ 1.44
TPM1-204ENST00000334895 ERCC4Q92889 916 aaPredicted RBP24.03■■□□□ 1.44
TPM1-204ENST00000334895 NACC1Q96RE7 527 aa24.03■■□□□ 1.44
TPM1-204ENST00000334895 DNM3Q9UQ16 869 aa24.03■■□□□ 1.44
TPM1-204ENST00000334895 TMEM150BA6NC51 233 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 A6NJR5 290 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 PLA2G4BP0C869 781 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 CASP1P29466 404 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 UTP14CQ5TAP6 766 aaKnown RBP24.02■■□□□ 1.44
TPM1-204ENST00000334895 TNMDQ9H2S6 317 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 MAGEF1Q9HAY2 307 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 LOXHD1Q8IVV2 1947 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 EYA4O95677 639 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 STAT5BP51692 787 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 SLC12A3P55017 1021 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 PRKCEQ02156 737 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 PNOCQ13519 176 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 DHX8Q14562 1220 aaKnown RBP24.02■■□□□ 1.44
TPM1-204ENST00000334895 RBM43Q6ZSC3 357 aaKnown RBP24.02■■□□□ 1.44
TPM1-204ENST00000334895 SYAP1Q96A49 352 aaPredicted RBP24.02■■□□□ 1.44
TPM1-204ENST00000334895 BHMT2Q9H2M3 363 aa24.02■■□□□ 1.44
TPM1-204ENST00000334895 MYADML2A6NDP7 307 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 PPFIA4O75335 1185 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 LGALS2P05162 132 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 YWHABP31946 246 aaKnown RBP24.01■■□□□ 1.43
TPM1-204ENST00000334895 POSTNQ15063 836 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 FAM160B1Q5W0V3 765 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 KANK3Q6NY19 840 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 ANO5Q75V66 913 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 ABHD8Q96I13 439 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 UPF3AQ9H1J1 476 aaKnown RBP24.01■■□□□ 1.43
TPM1-204ENST00000334895 SYNRGQ9UMZ2 1314 aa24.01■■□□□ 1.43
TPM1-204ENST00000334895 ARID2Q68CP9 1835 aa24■■□□□ 1.43
TPM1-204ENST00000334895 MYCP01106 439 aaPredicted RBP24■■□□□ 1.43
TPM1-204ENST00000334895 GJA9P57773 515 aa24■■□□□ 1.43
TPM1-204ENST00000334895 SV2BQ7L1I2 683 aa24■■□□□ 1.43
TPM1-204ENST00000334895 PLPPR4Q7Z2D5 763 aa24■■□□□ 1.43
TPM1-204ENST00000334895 TRMT1LQ7Z2T5 733 aaKnown RBP24■■□□□ 1.43
TPM1-204ENST00000334895 CKAP2LQ8IYA6 745 aa24■■□□□ 1.43
TPM1-204ENST00000334895 SYT2Q8N9I0 419 aaPredicted RBP24■■□□□ 1.43
TPM1-204ENST00000334895 C16orf70Q9BSU1 422 aa24■■□□□ 1.43
TPM1-204ENST00000334895 AP5M1Q9H0R1 490 aa24■■□□□ 1.43
TPM1-204ENST00000334895 AZI2Q9H6S1 392 aa24■■□□□ 1.43
TPM1-204ENST00000334895 KIAA0100Q14667 2235 aaKnown RBP24■■□□□ 1.43
TPM1-204ENST00000334895 MYMKA6NI61 221 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 DKC1O60832 514 aaKnown RBP eCLIP23.99■■□□□ 1.43
TPM1-204ENST00000334895 ZNF286BP0CG31 522 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 RARBP10826 455 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 BEX3Q00994 111 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 CUL4BQ13620 913 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 ZSCAN23Q3MJ62 389 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 PLA2G4FQ68DD2 849 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 GLG1Q92896 1179 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 SH2D3AQ9BRG2 576 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 GZF1Q9H116 711 aaPredicted RBP23.99■■□□□ 1.43
TPM1-204ENST00000334895 BLZF1Q9H2G9 400 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 DDX20Q9UHI6 824 aaKnown RBP23.99■■□□□ 1.43
TPM1-204ENST00000334895 DBR1Q9UK59 544 aaKnown RBP23.99■■□□□ 1.43
TPM1-204ENST00000334895 FRMPD3Q5JV73 1810 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 PGK1P00558 417 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 OATP04181 439 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 SSBP05455 408 aaKnown RBP eCLIP23.99■■□□□ 1.43
TPM1-204ENST00000334895 XRCC6P12956 609 aaKnown RBP eCLIP23.99■■□□□ 1.43
TPM1-204ENST00000334895 RARRES1P49788 294 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 NKX3-2P78367 333 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 DPYDQ12882 1025 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 DGKDQ16760 1214 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 ARMC5Q96C12 935 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 TRIM9Q9C026 710 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 SMARCAD1Q9H4L7 1026 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 ANKEF1Q9NU02 776 aa23.99■■□□□ 1.43
TPM1-204ENST00000334895 GTPBP6O43824 516 aaPredicted RBP23.98■■□□□ 1.43
TPM1-204ENST00000334895 CYP11B2P19099 503 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 MARK3P27448 753 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 NPEPPSP55786 919 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 FSCN1Q16658 493 aaKnown RBP23.98■■□□□ 1.43
TPM1-204ENST00000334895 ARSHQ5FYA8 562 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 XKR3Q5GH77 459 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 ZNF333Q96JL9 665 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 RUSC1Q9BVN2 902 aa23.98■■□□□ 1.43
TPM1-204ENST00000334895 HMX1Q9NP08 348 aaPredicted RBP23.98■■□□□ 1.43
TPM1-204ENST00000334895 CPT1AP50416 773 aa23.97■■□□□ 1.43
TPM1-204ENST00000334895 PLCB4Q15147 1175 aa23.97■■□□□ 1.43
TPM1-204ENST00000334895 GPBP1Q86WP2 473 aa23.97■■□□□ 1.43
TPM1-204ENST00000334895 C7orf25Q9BPX7 421 aa23.97■■□□□ 1.43
TPM1-204ENST00000334895 XPNPEP3Q9NQH7 507 aa23.97■■□□□ 1.43
TPM1-204ENST00000334895 SEPT9Q9UHD8 586 aaPredicted RBP23.97■■□□□ 1.43
TPM1-204ENST00000334895 C6orf222P0C671 652 aaPredicted RBP23.96■■□□□ 1.43
TPM1-204ENST00000334895 MTFR1Q15390 333 aa23.96■■□□□ 1.43
TPM1-204ENST00000334895 RINT1Q6NUQ1 792 aa23.96■■□□□ 1.43
TPM1-204ENST00000334895 CCDC34Q96HJ3 373 aa23.96■■□□□ 1.43
TPM1-204ENST00000334895 PCDHA5Q9Y5H7 936 aa23.96■■□□□ 1.43
TPM1-204ENST00000334895 NPHP3-ACAD11A0A0J9YXS1 232 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms