RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NFRKBQ6P4R8 1299 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 GJA10Q969M2 543 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 LENG9Q96B70 501 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 VWCEQ96DN2 955 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 UBE2OQ9C0C9 1292 aaKnown RBP18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 EHMT1Q9H9B1 1298 aa18.45■□□□□ 0.54
PDLIM1-201ENST00000329399 MROH7Q68CQ1 1323 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 XRCC6P12956 609 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 ZNF76P36508 570 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 TYRO3Q06418 890 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 CAMK4Q16566 473 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 C9orf50Q5SZB4 431 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 PLA2G4DQ86XP0 818 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 TBCKQ8TEA7 893 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 CLIC6Q96NY7 704 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 PCYT2Q99447 389 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 NOC4LQ9BVI4 516 aaKnown RBP18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 RAB34Q9BZG1 259 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 CSRNP2Q9H175 543 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 ANO10Q9NW15 660 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 KIAA1468Q9P260 1216 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 CDH23Q9H251 3354 aa18.44■□□□□ 0.54
PDLIM1-201ENST00000329399 NOP56O00567 594 aaKnown RBP18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 MAFGO15525 162 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 SLC26A4O43511 780 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 NEMFO60524 1076 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 CCNE2O96020 404 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 CIITAP33076 1130 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 WNT8BQ93098 351 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 LBHD1Q9BQE6 289 aaPredicted RBP18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 WNT8AQ9H1J5 351 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 RNPEPQ9H4A4 650 aa18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 TRIP12Q14669 1992 aaPredicted RBP18.43■□□□□ 0.54
PDLIM1-201ENST00000329399 H3BRB1 525 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 SOX1O00570 391 aaPredicted RBP18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 CCNT1O60563 726 aaKnown RBP18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 TCF7P36402 384 aaPredicted RBP18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 CCL23P55773 120 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 SHHQ15465 462 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 STX1AQ16623 288 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 PRR16Q569H4 304 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 KRBA2Q6ZNG9 492 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 DHX38Q92620 1227 aaKnown RBP18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 CDHR1Q96JP9 859 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 NAT10Q9H0A0 1025 aaKnown RBP18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
PDLIM1-201ENST00000329399 DDX39AO00148 427 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 TLR3O15455 904 aaKnown RBP18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 TDP2O95551 362 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 CSF2RAP15509 400 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 PTGISQ16647 500 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 LETM2Q2VYF4 491 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 MFSD5Q6N075 450 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 NIPA1Q7RTP0 329 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 SESTD1Q86VW0 696 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 IQUBQ8NA54 791 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 HIPK3Q9H422 1215 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
PDLIM1-201ENST00000329399 CYP3A7-CYP3A51PA0A087WV96 503 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 VWA3AA6NCI4 1184 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 ACRP10323 421 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 CYP3A7P24462 503 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 FXR1P51114 621 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 PDIA5Q14554 519 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 TMEM266Q2M3C6 531 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 CKAP2LQ8IYA6 745 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 GIMAP8Q8ND71 665 aaPredicted RBP18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 FAM200AQ8TCP9 573 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 SEPT1Q8WYJ6 367 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 SCLYQ96I15 445 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 SEZ6LQ9BYH1 1024 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 CCSER1Q9C0I3 900 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 CUEDC2Q9H467 287 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 JPH1Q9HDC5 661 aaPredicted RBP18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 SLC9A2Q9UBY0 812 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 STK24Q9Y6E0 443 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 NFASCO94856 1347 aa18.4■□□□□ 0.54
PDLIM1-201ENST00000329399 IPO5O00410 1097 aaKnown RBP18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 MSH4O15457 936 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 MYL1P05976 194 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 SLFN14P0C7P3 912 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 ACTR2P61160 394 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 CEP57L1Q8IYX8 460 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 C7orf31Q8N865 590 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 MAGEF1Q9HAY2 307 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 SETD4Q9NVD3 440 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 TUBE1Q9UJT0 475 aa18.39■□□□□ 0.54
PDLIM1-201ENST00000329399 WNT7AO00755 349 aa18.39■□□□□ 0.53
PDLIM1-201ENST00000329399 TBX3O15119 743 aa18.39■□□□□ 0.53
PDLIM1-201ENST00000329399 POLR2DO15514 142 aaKnown RBP18.39■□□□□ 0.53
PDLIM1-201ENST00000329399 SMIM10L2AP0DMW4 78 aa18.39■□□□□ 0.53
PDLIM1-201ENST00000329399 SMIM10L2BP0DMW5 78 aa18.39■□□□□ 0.53
PDLIM1-201ENST00000329399 MARK3P27448 753 aa18.39■□□□□ 0.53
PDLIM1-201ENST00000329399 FXR2P51116 673 aaKnown RBP eCLIP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms