RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 PCYT2Q99447 389 aa26.54■■□□□ 1.84
TMEM54-201ENST00000329151 IBSPP21815 317 aaPredicted RBP26.53■■□□□ 1.84
TMEM54-201ENST00000329151 RCAN1P53805 252 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 AKAP17AQ02040 695 aaKnown RBP26.53■■□□□ 1.84
TMEM54-201ENST00000329151 JAKMIP3Q5VZ66 844 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 MCTP2Q6DN12 878 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 TYW1BQ6NUM6 668 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 PLA2G4DQ86XP0 818 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 CKAP2LQ8IYA6 745 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 NME8Q8N427 588 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.53■■□□□ 1.84
TMEM54-201ENST00000329151 TRAPPC12Q8WVT3 735 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 ZBTB10Q96DT7 871 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 FAM122AQ96E09 287 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 TMEM260Q9NX78 707 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 GINS2Q9Y248 185 aa26.53■■□□□ 1.84
TMEM54-201ENST00000329151 SMIM35A0A1B0GVV1 85 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 C5orf67F2Z3F1 127 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 MEIS1O00470 390 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 CSPG5O95196 566 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 KRT76Q01546 638 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 TSGA10IPQ3SY00 556 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 ODR4Q5SWX8 454 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 MIS18BP1Q6P0N0 1132 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 NIPA1Q7RTP0 329 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 NPAS4Q8IUM7 802 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 FAM178BQ8IXR5 827 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 EVPLQ92817 2033 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 CELF4Q9BZC1 486 aaKnown RBP26.52■■□□□ 1.84
TMEM54-201ENST00000329151 C6orf50Q9HD87 102 aa26.52■■□□□ 1.84
TMEM54-201ENST00000329151 RNF216Q9NWF9 866 aaPredicted RBP26.52■■□□□ 1.84
TMEM54-201ENST00000329151 HBP1O60381 514 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 IL9P15248 144 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 ITGB3BPQ13352 177 aaPredicted RBP26.51■■□□□ 1.83
TMEM54-201ENST00000329151 ADCK5Q3MIX3 580 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 PDXDC2PQ6P474 469 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 RASEFQ8IZ41 740 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 PLVAPQ9BX97 442 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 AGO3Q9H9G7 860 aaKnown RBP26.51■■□□□ 1.83
TMEM54-201ENST00000329151 ZNF302Q9NR11 478 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 PADI3Q9ULW8 664 aa26.51■■□□□ 1.83
TMEM54-201ENST00000329151 GRXCR2A6NFK2 248 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 DGKIO75912 1065 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 SCG2P13521 617 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 FUT2Q10981 343 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 NFX1Q12986 1120 aaKnown RBP26.5■■□□□ 1.83
TMEM54-201ENST00000329151 MTHFD1LQ6UB35 978 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 NEK9Q8TD19 979 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 CLP1Q92989 425 aaKnown RBP26.5■■□□□ 1.83
TMEM54-201ENST00000329151 LRFN3Q9BTN0 628 aa26.5■■□□□ 1.83
TMEM54-201ENST00000329151 IGSF9BQ9UPX0 1349 aa26.49■■□□□ 1.83
TMEM54-201ENST00000329151 SETQ01105 290 aaPredicted RBP26.49■■□□□ 1.83
TMEM54-201ENST00000329151 PFKFB3Q16875 520 aaPredicted RBP26.49■■□□□ 1.83
TMEM54-201ENST00000329151 PAN2Q504Q3 1202 aaKnown RBP26.49■■□□□ 1.83
TMEM54-201ENST00000329151 CMTR2Q8IYT2 770 aaKnown RBP26.49■■□□□ 1.83
TMEM54-201ENST00000329151 REXO1Q8N1G1 1221 aaKnown RBP26.49■■□□□ 1.83
TMEM54-201ENST00000329151 ATP8B4Q8TF62 1192 aa26.49■■□□□ 1.83
TMEM54-201ENST00000329151 ZNF577Q9BSK1 485 aa26.49■■□□□ 1.83
TMEM54-201ENST00000329151 COL1A2P08123 1366 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 IPO5O00410 1097 aaKnown RBP26.48■■□□□ 1.83
TMEM54-201ENST00000329151 GRM6O15303 877 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 KLRC1P26715 233 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 GNA11P29992 359 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 CDC27P30260 824 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 ZNF484Q5JVG2 852 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 SPOUT1Q5T280 376 aaKnown RBP26.48■■□□□ 1.83
TMEM54-201ENST00000329151 BLOC1S2Q6QNY1 142 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 SKAP1Q86WV1 359 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 ZNF689Q96CS4 500 aaPredicted RBP26.48■■□□□ 1.83
TMEM54-201ENST00000329151 JAKMIP1Q96N16 626 aaKnown RBP26.48■■□□□ 1.83
TMEM54-201ENST00000329151 IGFLR1Q9H665 355 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 TBC1D22BQ9NU19 505 aa26.48■■□□□ 1.83
TMEM54-201ENST00000329151 DENND3A2RUS2 1198 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 RPS6KA5O75582 802 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 ATG7O95352 703 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 ALADP13716 330 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 ADD1P35611 737 aaKnown RBP26.47■■□□□ 1.83
TMEM54-201ENST00000329151 CLK2P49760 499 aaKnown RBP26.47■■□□□ 1.83
TMEM54-201ENST00000329151 APOBRQ0VD83 1088 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 CSPP1Q1MSJ5 1256 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 FAM43BQ6ZT52 329 aaPredicted RBP26.47■■□□□ 1.83
TMEM54-201ENST00000329151 Q6ZUG5 572 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 BICD2Q8TD16 824 aa26.47■■□□□ 1.83
TMEM54-201ENST00000329151 RC3H2Q9HBD1 1191 aaKnown RBP26.47■■□□□ 1.83
TMEM54-201ENST00000329151 KDM3AQ9Y4C1 1321 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 PI4K2BG5E9Z4 385 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 GPR37L1O60883 481 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 PLA2G5P39877 138 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 NAALADL2Q58DX5 795 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 SWSAP1Q6NVH7 229 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 ABHD15Q6UXT9 468 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 BRF1Q92994 677 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 P2RX5Q93086 422 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 ALG13Q9NP73 1137 aaKnown RBP26.46■■□□□ 1.83
TMEM54-201ENST00000329151 SAMM50Q9Y512 469 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 PCDHB7Q9Y5E2 793 aa26.46■■□□□ 1.83
TMEM54-201ENST00000329151 MRPL42Q9Y6G3 142 aaKnown RBP26.46■■□□□ 1.83
TMEM54-201ENST00000329151 ATG2AQ2TAZ0 1938 aa26.45■■□□□ 1.83
TMEM54-201ENST00000329151 KIAA1671Q9BY89 1806 aa26.45■■□□□ 1.82
TMEM54-201ENST00000329151 ESYT2A0FGR8 921 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms