RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 C6orf222P0C671 652 aaPredicted RBP2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 ZNF28P17035 718 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 CNR2P34972 360 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 PAN2Q504Q3 1202 aaKnown RBP2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 TMC5Q6UXY8 1006 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 EP400NLQ6ZTU2 488 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 NLGN4XQ8N0W4 816 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 FBXW5Q969U6 566 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 DNAJC7Q99615 494 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 OSBPL2Q9H1P3 480 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 DLL4Q9NR61 685 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 DEPDC5O75140 1603 aa2.44□□□□□ -2.02
CCDC144A-201ENST00000328495 ADGRB2O60241 1585 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 POGZQ7Z3K3 1410 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CCDC163A0A0D9SF12 145 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 MROH6A6NGR9 719 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 WNT9AO14904 365 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 NKRFO15226 690 aaKnown RBP eCLIP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CYP1A1P04798 512 aaPredicted RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 FAHP16930 419 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 ST5P78524 1137 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 RTP5Q14D33 572 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 GPR19Q15760 415 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 NFE2L2Q16236 605 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 LGI4Q8N135 537 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 TXNDC5Q8NBS9 432 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 THAP3Q8WTV1 239 aaPredicted RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CLEC4DQ8WXI8 215 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 DDX1Q92499 740 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 LCORQ96JN0 433 aaPredicted RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 DNAJC2Q99543 621 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 PDGFDQ9GZP0 370 aaPredicted RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CATSPERZQ9NTU4 200 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 FTSJ1Q9UET6 329 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 URB2Q14146 1524 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 ZMYM4Q5VZL5 1548 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 TULP4Q9NRJ4 1543 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 NEURL4Q96JN8 1562 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 PARD3Q8TEW0 1356 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 ARVCFO00192 962 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 EPHA5P54756 1037 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 MCTP2Q6DN12 878 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 PLEKHH3Q7Z736 793 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 ZC3H7AQ8IWR0 971 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 TMEM168Q9H0V1 697 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 NDOR1Q9UHB4 597 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 SRPK3Q9UPE1 567 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 FANCAO15360 1455 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 PRICKLE3O43900 615 aaPredicted RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 FBXO21O94952 628 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 LTFP02788 710 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 GJA4P35212 333 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 IL13P35225 146 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 FIGNQ5HY92 759 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 TRMT10BQ6PF06 316 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 FERMT3Q86UX7 667 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 RBM12BQ8IXT5 1001 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 DTX3Q8N9I9 347 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 PCDH19Q8TAB3 1148 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 KISS1RQ969F8 398 aaPredicted RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CD244Q9BZW8 370 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 SFMBT1Q9UHJ3 866 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CNOT11Q9UKZ1 510 aaKnown RBP2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 PCDHA8Q9Y5H6 950 aa2.43□□□□□ -2.02
CCDC144A-201ENST00000328495 CADPSQ9ULU8 1353 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 CRTAMO95727 393 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 CHGBP05060 677 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 ENO2P09104 434 aaPredicted RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 SRGAP2CP0DJJ0 459 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 PLP2Q04941 152 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 CRY1Q16526 586 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 SKIDA1Q1XH10 827 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 C2orf27AQ580R0 203 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 CD276Q5ZPR3 534 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 ARHGAP36Q6ZRI8 547 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 C16orf59Q7L2K0 433 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 PROSER1Q86XN7 944 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 YTHDC1Q96MU7 727 aaKnown RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 KRTAP4-7Q9BYR0 210 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 BARX1Q9HBU1 254 aaPredicted RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 PCDHA9Q9Y5H5 950 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 TNS1Q9HBL0 1735 aaKnown RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 RPRD2Q5VT52 1461 aaKnown RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 KMT2BQ9UMN6 2715 aaPredicted RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 K7ESM1 405 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 PYGMP11217 842 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 MLLT6P55198 1093 aaPredicted RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 SURF1Q15526 300 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 SMAD2Q15796 467 aaKnown RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 TRIM61Q5EBN2 209 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 BTBD8Q5XKL5 378 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 ZCCHC14Q8WYQ9 949 aaKnown RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 MRFAP1L1Q96HT8 127 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 MAGEB10Q96LZ2 347 aaPredicted RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 MRPL4Q9BYD3 311 aaKnown RBP2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 SLC52A2Q9HAB3 445 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 RIC8BQ9NVN3 520 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 ARHGAP20Q9P2F6 1191 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 RBPJLQ9UBG7 517 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 ZFP69BQ9UJL9 534 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms