RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ZKSCAN5Q9Y2L8 839 aa5.45□□□□□ -1.54
SKP1-201ENST00000328392 NCANO14594 1321 aa5.45□□□□□ -1.54
SKP1-201ENST00000328392 TCRBV5S4A2TA0A5A2 114 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 SCDO00767 359 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 AMY2AP04746 511 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 AMY2BP19961 511 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 CDK11BP21127 795 aaKnown RBP5.44□□□□□ -1.54
SKP1-201ENST00000328392 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
SKP1-201ENST00000328392 CYP4F22Q6NT55 531 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 AFAP1L2Q8N4X5 818 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 UHMK1Q8TAS1 419 aaKnown RBP5.44□□□□□ -1.54
SKP1-201ENST00000328392 SH3RF2Q8TEC5 729 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 CHTF18Q8WVB6 975 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 TEPSINQ96N21 525 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 SMURF1Q9HCE7 757 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 NGRNQ9NPE2 291 aaKnown RBP5.44□□□□□ -1.54
SKP1-201ENST00000328392 MCM8Q9UJA3 840 aa5.44□□□□□ -1.54
SKP1-201ENST00000328392 ZNF561-AS1K7EIQ3 104 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 NEMP1O14524 444 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 MAFKO60675 156 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 ATP2A2P16615 1042 aaKnown RBP5.43□□□□□ -1.54
SKP1-201ENST00000328392 POU3F2P20265 443 aaPredicted RBP5.43□□□□□ -1.54
SKP1-201ENST00000328392 GJA9P57773 515 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 GPR19Q15760 415 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 RGL3Q3MIN7 710 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 TRIM48Q8IWZ4 208 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 RPUSD2Q8IZ73 545 aaKnown RBP5.43□□□□□ -1.54
SKP1-201ENST00000328392 TXNDC5Q8NBS9 432 aaKnown RBP5.43□□□□□ -1.54
SKP1-201ENST00000328392 CXorf38Q8TB03 319 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 COG1Q8WTW3 980 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 TTC1Q99614 292 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 CROTQ9UKG9 612 aa5.43□□□□□ -1.54
SKP1-201ENST00000328392 ACOT7O00154 380 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 MAN2B1O00754 1011 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 F2P00734 622 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 SYN1P17600 705 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 CNR2P34972 360 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 ADCYAP1R1P41586 468 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 IRF9Q00978 393 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 STAT4Q14765 748 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 TMEM132BQ14DG7 1078 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 PAN2Q504Q3 1202 aaKnown RBP5.42□□□□□ -1.54
SKP1-201ENST00000328392 TTLL11Q8NHH1 800 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 BDH2Q9BUT1 245 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 TMX1Q9H3N1 280 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 SPTLC3Q9NUV7 552 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 RIC8BQ9NVN3 520 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 B4GALT6Q9UBX8 382 aa5.42□□□□□ -1.54
SKP1-201ENST00000328392 SLC12A8A0AV02 714 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 WNT9AO14904 365 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 RAB11FIP3O75154 756 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 KATNA1O75449 491 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 FKBP9O95302 570 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 CPEP16870 476 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 FAHP16930 419 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 ZNF28P17035 718 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 SLC9A1P19634 815 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 IL13P35225 146 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 GUCY2FP51841 1108 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 KPNA1P52294 538 aaPredicted RBP5.41□□□□□ -1.54
SKP1-201ENST00000328392 DSG1Q02413 1049 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 DHCR24Q15392 516 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 ZFYVE27Q5T4F4 411 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 PRAMEF18Q5VWM3 479 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 FKBP9P1Q75LS8 142 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 HDGFL2Q7Z4V5 671 aaPredicted RBP5.41□□□□□ -1.54
SKP1-201ENST00000328392 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.41□□□□□ -1.54
SKP1-201ENST00000328392 SMC1BQ8NDV3 1235 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 ZCCHC14Q8WYQ9 949 aaKnown RBP5.41□□□□□ -1.54
SKP1-201ENST00000328392 CLIC6Q96NY7 704 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 SMAD5Q99717 465 aaKnown RBP5.41□□□□□ -1.54
SKP1-201ENST00000328392 IFT22Q9H7X7 185 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 HOMER2Q9NSB8 354 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 OXSMQ9NWU1 459 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 SRPK3Q9UPE1 567 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 ATP23Q9Y6H3 246 aa5.41□□□□□ -1.54
SKP1-201ENST00000328392 H7C1D1 291 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 NPTXRO95502 500 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 EYA4O95677 639 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 HMGB1P09429 215 aaKnown RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 MECP2P51608 486 aaKnown RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 KIF11P52732 1056 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 EPHA5P54756 1037 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 LACTBP83111 547 aaPredicted RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 SEC23AQ15436 765 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 ATP13A4Q4VNC1 1196 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 KCTD1Q719H9 257 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 ERCC4Q92889 916 aaPredicted RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 MTMR8Q96EF0 704 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 TMEM209Q96SK2 561 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 BOCQ9BWV1 1114 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 BRINP2Q9C0B6 783 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 PDGFDQ9GZP0 370 aaPredicted RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 CCDC8Q9H0W5 538 aaPredicted RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 MS4A5Q9H3V2 200 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 PCIF1Q9H4Z3 704 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms