RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RNPC3Q96LT9 517 aaKnown RBP14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 RABGAP1Q9Y3P9 1069 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 BBOX1O75936 387 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 NR3C1P04150 777 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 STAT1P42224 750 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 ZNF211Q13398 564 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 ZC2HC1CQ53FD0 456 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 FBXW10Q5XX13 1052 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 CDC42EP5Q6NZY7 148 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 HS2ST1Q7LGA3 356 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 GLYCTKQ8IVS8 523 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 CELF4Q9BZC1 486 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 CHORDC1Q9UHD1 332 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 UBAP1LF5GYI3 381 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 CORO7P57737 925 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 KNOP1Q1ED39 458 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 TAX1BP1Q86VP1 789 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 SH2D3AQ9BRG2 576 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 AMNQ9BXJ7 453 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 ROBO3Q96MS0 1386 aa14.08□□□□□ -0.16
HMGCS1-201ENST00000325110 PGRMC1O00264 195 aaKnown RBP14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 DAPK3O43293 454 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 SLFN12Q8IYM2 578 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 CTNNBL1Q8WYA6 563 aaPredicted RBP14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 SART1O43290 800 aaKnown RBP14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 AKAP3O75969 853 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 KIF4AO95239 1232 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 SHMT1P34896 483 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 IFT88Q13099 833 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 MSL3Q8N5Y2 521 aaKnown RBP14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 KCNQ5Q9NR82 932 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 ATP8A1Q9Y2Q0 1164 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 NOC2LQ9Y3T9 749 aaKnown RBP14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 ITGA4P13612 1032 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 PRLRP16471 622 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 FAM186BQ8IYM0 893 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 CERS5Q8N5B7 392 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 TCEAL9Q9UHQ7 104 aa14.07□□□□□ -0.16
HMGCS1-201ENST00000325110 ZBTB39O15060 712 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 EXOC3O60645 756 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 FGGP02679 453 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 CCDC25Q86WR0 208 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 SELENOSQ9BQE4 189 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 PCIF1Q9H4Z3 704 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 GOLGA6L7A0A1B0GV03 622 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 F5H6K3 240 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 TNFAIP3P21580 790 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 KLRC3Q07444 240 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 CEP89Q96ST8 783 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 SWAP70Q9UH65 585 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 NAGPAQ9UK23 515 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 ROBO1Q9Y6N7 1651 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 A0A087WUV0 522 aaPredicted RBP14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 TTI1O43156 1089 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 PJA2O43164 708 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 IL1R1P14778 569 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 NT5C2P49902 561 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 LMBR1Q8WVP7 490 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 RUSC1Q9BVN2 902 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 RNF14Q9UBS8 474 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 AMFRQ9UKV5 643 aa14.06□□□□□ -0.16
HMGCS1-201ENST00000325110 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 SMARCA1P28370 1054 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 DHX9Q08211 1270 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 GLE1Q53GS7 698 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 MEI1Q5TIA1 1274 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 METTL13Q8N6R0 699 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 TRIM51Q9BSJ1 452 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 NOVA2Q9UNW9 492 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 ARAP2Q8WZ64 1704 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 ZC3H4Q9UPT8 1303 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 A0A1B0GUL6 1792 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 EDIL3O43854 480 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 GH2P01242 217 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 PON1P27169 355 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 TMOD1P28289 359 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 CRKP46108 304 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 ZCWPW2Q504Y3 356 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 ARSHQ5FYA8 562 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 ODR4Q5SWX8 454 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 LRRC45Q96CN5 670 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 OSGEPQ9NPF4 335 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 CTTNBP2NLQ9P2B4 639 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 FBXL5Q9UKA1 691 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 FRMD4BQ9Y2L6 1034 aa14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 UTP11Q9Y3A2 253 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-201ENST00000325110 GYS1P13807 737 aa14.04□□□□□ -0.16
HMGCS1-201ENST00000325110 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms