RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	UBL4B	Q8N7F7	174 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	RNF181	Q9P0P0	153 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	DNAJC12	Q9UKB3	198 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	TFRC	P02786	760 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	IL1R1	P14778	569 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	GAP43	P17677	238 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	RHBDL3	P58872	404 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	PLA2G4F	Q68DD2	849 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	ACCS	Q96QU6	501 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	IWS1	Q96ST2	819 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	DEFB129	Q9H1M3	183 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	UTP11	Q9Y3A2	253 aa	Known RBP	12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	RHOBTB3	O94955	611 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	ATF7	P17544	494 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	USP11	P51784	963 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	MKRN4P	Q13434	485 aa	Predicted RBP	12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	SNX1	Q13596	522 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	ZNF365	Q70YC5	407 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	DPP9	Q86TI2	863 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	ZNF384	Q8TF68	577 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	FAM184B	Q9ULE4	1060 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	AKAP12	Q02952	1782 aa		12.88	□□□□□ -0.35
DDR1-223	ENST00000324771	GOLGA6L7	A0A1B0GV03	622 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	SLC9A1	P19634	815 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	GRB10	Q13322	594 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	KRT71	Q3SY84	523 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	C10orf67	Q8IYJ2	551 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	AFAP1L1	Q8TED9	768 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	NT5C1B	Q96P26	610 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	PALM	O75781	387 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	ATP1A1	P05023	1023 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	CNGA1	P29973	690 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	CXCL9	Q07325	125 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	CEP85L	Q5SZL2	805 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	CATSPER3	Q86XQ3	398 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	FAM151A	Q8WW52	585 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	VCPKMT	Q9H867	229 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	MTRF1L	Q9UGC7	380 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	DUSP10	Q9Y6W6	482 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771		K7ERI5	159 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	HEXIM1	O94992	359 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	BRD3	Q15059	726 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	ZNF354C	Q86Y25	554 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	ZNF653	Q96CK0	615 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	ATG4C	Q96DT6	458 aa		12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	DNAJC17	Q9NVM6	304 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-223	ENST00000324771	GOLGA8S	H3BPF8	625 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	HIP1R	O75146	1068 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	MED24	O75448	989 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	TMEM191B	P0C7N4	346 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PIK3CA	P42336	1068 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PSMC6	P62333	389 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	APBA1	Q02410	837 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	TUBB2A	Q13885	445 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	GOLGA5	Q8TBA6	731 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	TUBB2B	Q9BVA1	445 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	GGA3	Q9NZ52	723 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	FEM1B	Q9UK73	627 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	DENND3	A2RUS2	1198 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	TUBB	P07437	444 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PDE6C	P51160	858 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	ADCY1	Q08828	1119 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PAK2	Q13177	524 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PDIA5	Q14554	519 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	KCNB1	Q14721	858 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	CPLX4	Q7Z7G2	160 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PASD1	Q8IV76	773 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	GLYCTK	Q8IVS8	523 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	FBXL16	Q8N461	479 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	FAM213A	Q9BRX8	229 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	KIFC3	Q9BVG8	833 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	SERPINA10	Q9UK55	444 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	AKT3	Q9Y243	479 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	PCDHB4	Q9Y5E5	795 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	MYO3B	Q8WXR4	1341 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	ZBTB39	O15060	712 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	BUB1B	O60566	1050 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	SERPING1	P05155	500 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	TM4SF1	P30408	202 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	QARS	P47897	775 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	ZNF211	Q13398	564 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	LIN9	Q5TKA1	542 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	SCYL2	Q6P3W7	929 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	GLIS3	Q8NEA6	775 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	ZDHHC15	Q96MV8	337 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	LIMA1	Q9UHB6	759 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	NOD1	Q9Y239	953 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	CCND2	P30279	289 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	GJB7	Q6PEY0	223 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	CCDC170	Q8IYT3	715 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	MYOZ2	Q9NPC6	264 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	NRBP2	Q9NSY0	501 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	IKBKG	Q9Y6K9	419 aa		12.86	□□□□□ -0.35
DDR1-223	ENST00000324771	ENTPD3	O75355	529 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	CA8	P35219	290 aa		12.85	□□□□□ -0.35

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