RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 XKR9Q5GH70 373 aa10.07□□□□□ -0.8
CD46-202ENST00000322918 HYIQ5T013 277 aa10.07□□□□□ -0.8
CD46-202ENST00000322918 SWSAP1Q6NVH7 229 aa10.07□□□□□ -0.8
CD46-202ENST00000322918 PAXIP1Q6ZW49 1069 aaPredicted RBP10.07□□□□□ -0.8
CD46-202ENST00000322918 ACRBPQ8NEB7 543 aa10.07□□□□□ -0.8
CD46-202ENST00000322918 NSUN6Q8TEA1 469 aaKnown RBP10.07□□□□□ -0.8
CD46-202ENST00000322918 SLC10A4Q96EP9 437 aa10.07□□□□□ -0.8
CD46-202ENST00000322918 RRAGCQ9HB90 399 aa10.07□□□□□ -0.8
CD46-202ENST00000322918 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 EPHB6O15197 1021 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 HIP1RO75146 1068 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 CASP4P49662 377 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 TBX2Q13207 712 aaPredicted RBP10.06□□□□□ -0.8
CD46-202ENST00000322918 FAM102BQ5T8I3 360 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 SYCP3Q8IZU3 236 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 REPS2Q8NFH8 660 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 NACC1Q96RE7 527 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 GABBR1Q9UBS5 961 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 MFAP3LO75121 409 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 RGS20O76081 388 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
CD46-202ENST00000322918 HERVK_113P62684 666 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 EPHA7Q15375 998 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 FKBP15Q5T1M5 1219 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 RAD9BQ6WBX8 426 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 POLR3CQ9BUI4 534 aaPredicted RBP10.06□□□□□ -0.8
CD46-202ENST00000322918 NDST4Q9H3R1 872 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 DNAI1Q9UI46 699 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 UBIAD1Q9Y5Z9 338 aa10.06□□□□□ -0.8
CD46-202ENST00000322918 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 CTIFO43310 598 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 ABL1P00519 1130 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 YWHABP31946 246 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 NAA30Q147X3 362 aaPredicted RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 MIIPQ5JXC2 388 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 ERO1BQ86YB8 467 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 TMEM139Q8IV31 216 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 RBM46Q8TBY0 533 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 PPP2R2CQ9Y2T4 447 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 LUC7L2Q9Y383 392 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 COL4A3BPQ9Y5P4 624 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 P4HBP07237 508 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 QARSP47897 775 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 FKBP3Q00688 224 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 SP2Q02086 613 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 VSIG10LQ86VR7 867 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 FAM114A1Q8IWE2 563 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 ZNF668Q96K58 619 aaPredicted RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 SPATC1LQ9H0A9 340 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 ZSWIM4Q9H7M6 989 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 PARVGQ9HBI0 331 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 PCDHA2Q9Y5H9 948 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 K7ENM7 598 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 MARK3P27448 753 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 HOXD13P35453 343 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 EHHADHQ08426 723 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 C1orf186Q6ZWK4 172 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 USP50Q70EL3 339 aaPredicted RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 RIT2Q99578 217 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 MOV10L1Q9BXT6 1211 aaKnown RBP10.05□□□□□ -0.8
CD46-202ENST00000322918 TUFT1Q9NNX1 390 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 GINM1Q9NU53 330 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 ABHD10Q9NUJ1 306 aa10.05□□□□□ -0.8
CD46-202ENST00000322918 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■□□ 14.7
CD46-202ENST00000322918 SBF1O95248 1867 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 ASTN1O14525 1302 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 RPTORQ8N122 1335 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 GJA5P36382 358 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 PBX1P40424 430 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 PEX3P56589 373 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 PSMD2Q13200 908 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 VWA3BQ502W6 1294 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 TMEM63BQ5T3F8 832 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 LRRC55Q6ZSA7 311 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 ARMC9Q7Z3E5 817 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 EFCC1Q9HA90 598 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 SEPT9Q9UHD8 586 aaPredicted RBP10.04□□□□□ -0.8
CD46-202ENST00000322918 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.04□□□□□ -0.8
CD46-202ENST00000322918 PITPNM2Q9BZ72 1349 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 ERICH4A6NGS2 130 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 LRRC10BA6NIK2 292 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 SLC16A4O15374 487 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
CD46-202ENST00000322918 DNM2P50570 870 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 ERVK-24P63145 666 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 KNOP1Q1ED39 458 aaKnown RBP10.04□□□□□ -0.8
CD46-202ENST00000322918 MTERF2Q49AM1 385 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
CD46-202ENST00000322918 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms