RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 TSPAN18Q96SJ8 248 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 A6NJR5 290 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 P4HA2O15460 535 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 MED7O43513 233 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 CCDC17Q96LX7 622 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 GOLGA8JA6NMD2 632 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 GOLGA8TH3BQL2 631 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 ANGPT2O15123 496 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 MAPK13O15264 365 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 UBE3CQ15386 1083 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 FBXO18Q8NFZ0 1043 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 HIC2Q96JB3 615 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 CLMNQ96JQ2 1002 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 BRIP1Q9BX63 1249 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 LIG4P49917 911 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 CHCHD4Q8N4Q1 142 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 CYTH2Q99418 400 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 ASNA1O43681 348 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 GRAMD1BQ3KR37 738 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 GIPC2Q8TF65 315 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 EYA1Q99502 592 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 PTPRTO14522 1441 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 UBE4BO95155 1302 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 COPB2P35606 906 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 RGL1Q9NZL6 768 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 MAP3K19Q56UN5 1328 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 STRNO43815 780 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 S100A6P06703 90 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 INHBAP08476 426 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 ARHGDIAP52565 204 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 PPARAQ07869 468 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 ZNF654Q8IZM8 581 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 NAF1Q96HR8 494 aaKnown RBP10.41□□□□□ -0.74
COL12A1-201ENST00000322507 TRAF3IP3Q9Y228 551 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 PEX14O75381 377 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 HLA-DPA1P20036 260 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 KRT20P35900 424 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 TCIRG1Q13488 830 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 PLD3Q8IV08 490 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 XPO4Q9C0E2 1151 aaKnown RBP10.41□□□□□ -0.74
COL12A1-201ENST00000322507 TMEM60Q9H2L4 133 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 PSTPIP2Q9H939 334 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 NIM1KQ8IY84 436 aa10.41□□□□□ -0.74
COL12A1-201ENST00000322507 SMCO2A6NFE2 343 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 H2AFZP0C0S5 128 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 POLR2MP0CAP2 368 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 CCNCP24863 283 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 H2AFVQ71UI9 128 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
COL12A1-201ENST00000322507 ADGRL3Q9HAR2 1447 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 KCNK3O14649 394 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 MED21Q13503 144 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 GPBP1Q86WP2 473 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 LMBRD1Q9NUN5 540 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 AP4S1Q9Y587 144 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 ZFYVE16Q7Z3T8 1539 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 ARMC3Q5W041 872 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 B4GALNT2Q8NHY0 566 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 ZNF532Q9HCE3 1301 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 AATKQ6ZMQ8 1374 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 KLC3Q6P597 504 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 MTA3Q9BTC8 594 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 EDEM3Q9BZQ6 932 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 SLC12A6Q9UHW9 1150 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 LCA5LO95447 670 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 NPR1P16066 1061 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 KPNB1Q14974 876 aaKnown RBP10.4□□□□□ -0.74
COL12A1-201ENST00000322507 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 KIRREL3Q8IZU9 778 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 TEKT3Q9BXF9 490 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
COL12A1-201ENST00000322507 PPIP5K2O43314 1243 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 SLC39A6Q13433 755 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 BBS9Q3SYG4 887 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 BEND3Q5T5X7 828 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 DEPDC1Q5TB30 811 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
COL12A1-201ENST00000322507 KLHL25Q9H0H3 589 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 PZPP20742 1482 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 MYO1FO00160 1098 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 PSMC6P62333 389 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 NEUROG2Q9H2A3 272 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 FAM207AQ9NSI2 230 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-201ENST00000322507 AIPL1Q9NZN9 384 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 DSEQ9UL01 958 aa10.4□□□□□ -0.74
COL12A1-201ENST00000322507 RNF123Q5XPI4 1314 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 CTSWP56202 376 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 FKBP3Q00688 224 aaKnown RBP10.4□□□□□ -0.75
COL12A1-201ENST00000322507 CAV1Q03135 178 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC149Q6ZUS6 474 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 PPP2R2CQ9Y2T4 447 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 IL13P35225 146 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 CROCCP3Q8IVE0 287 aa10.4□□□□□ -0.75
COL12A1-201ENST00000322507 EPN1Q9Y6I3 576 aaPredicted RBP10.4□□□□□ -0.75
COL12A1-201ENST00000322507 MSH2P43246 934 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms