RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 DNAAF2Q9NVR5 837 aaKnown RBP8.65□□□□□ -1.03
RTL3-201ENST00000321110 CYP39A1Q9NYL5 469 aa8.65□□□□□ -1.03
RTL3-201ENST00000321110 BLOC1S6Q9UL45 172 aa8.65□□□□□ -1.03
RTL3-201ENST00000321110 SLIT3O75094 1523 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 MYH1P12882 1939 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 TCRBV5S4A2TA0A5A2 114 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 E7ENQ6 273 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PDLIM1O00151 329 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 RGS16O15492 202 aaPredicted RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 BAG3O95817 575 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 SETSIPP0DME0 302 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 TATP17735 454 aaPredicted RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 ADRA2BP18089 450 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PTDSS1P48651 473 aaKnown RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 PDE4DQ08499 809 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 CCDC84Q86UT8 332 aaPredicted RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 CADPS2Q86UW7 1296 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 SUPT20HQ8NEM7 779 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 DNAJC9Q8WXX5 260 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 MMTAG2Q9BU76 263 aaKnown RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PRKAG3Q9UGI9 489 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PRPF3O43395 683 aaKnown RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 UNC5CO95185 931 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 TPP2P29144 1249 aaPredicted RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 RCAN1P53805 252 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 POU5F1Q01860 360 aaKnown RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 DYNC1I2Q13409 638 aaKnown RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 SLC9C1Q4G0N8 1177 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 DNAAF5Q86Y56 855 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.64□□□□□ -1.03
RTL3-201ENST00000321110 SYCP3Q8IZU3 236 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PIGOQ8TEQ8 1089 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 TRAPPC9Q96Q05 1148 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 ZMYND12Q9H0C1 365 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PABPC3Q9H361 631 aaKnown RBP8.64□□□□□ -1.03
RTL3-201ENST00000321110 SLITRK6Q9H5Y7 841 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 FAM114A2Q9NRY5 505 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 ZDHHC18Q9NUE0 388 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 PHF24Q9UPV7 400 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 ARL2BPQ9Y2Y0 163 aa8.64□□□□□ -1.03
RTL3-201ENST00000321110 ARFGEF2Q9Y6D5 1785 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 CCDC169A6NNP5 214 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 H0Y3Z8 333 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 CCDC188H7C350 402 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 O00370 1275 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 PRKAB2O43741 272 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 CREB3O43889 395 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 NOL4O94818 638 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 AGTP01019 485 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 SERPING1P05155 500 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 MYL1P05976 194 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 SLCO1A2P46721 670 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 PMS2P54278 862 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 SLC29A2Q14542 456 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 SLC18A3Q16572 532 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 MAN2A1Q16706 1144 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 SPDYCQ5MJ68 293 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 ARL6IP4Q66PJ3 421 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 IRGCQ6NXR0 463 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 LRRC57Q8N9N7 239 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 KIAA0895Q8NCT3 520 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 FAM13CQ8NE31 585 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 UHMK1Q8TAS1 419 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 NEK9Q8TD19 979 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 EPS8L3Q8TE67 593 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 DTNBP1Q96EV8 351 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 NUDCD1Q96RS6 583 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 DDX23Q9BUQ8 820 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 MMADHCQ9H3L0 296 aaPredicted RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 SUDS3Q9H7L9 328 aaPredicted RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 ZWILCHQ9H900 591 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 ADAMTS1Q9UHI8 967 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 ZNF232Q9UNY5 417 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 NR2E1Q9Y466 385 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 MBD4O95243 580 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 VEGFAP15692 232 aaPredicted RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 SKIV2L2P42285 1042 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 SEC23AQ15436 765 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 DENND2CQ68D51 928 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 CGB2Q6NT52 195 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 COL23A1Q86Y22 540 aaPredicted RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 ENDOVQ8N8Q3 282 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 TTC8Q8TAM2 541 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 MGARPQ8TDB4 240 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 NDNQ99608 321 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
RTL3-201ENST00000321110 VCXQ9H320 206 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 UTP11Q9Y3A2 253 aaKnown RBP8.63□□□□□ -1.03
RTL3-201ENST00000321110 ATP6V0A2Q9Y487 856 aa8.63□□□□□ -1.03
RTL3-201ENST00000321110 RGPD5Q99666 1765 aa8.62□□□□□ -1.03
RTL3-201ENST00000321110 SCN11AQ9UI33 1791 aa8.62□□□□□ -1.03
RTL3-201ENST00000321110 PCDH11XQ9BZA7 1347 aa8.62□□□□□ -1.03
RTL3-201ENST00000321110 MYH6P13533 1939 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms