RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CHST3Q7LGC8 479 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SESTD1Q86VW0 696 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ANKRD35Q8N283 1001 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ERMNQ8TAM6 284 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 MAML3Q96JK9 1138 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 NT5C3AQ9H0P0 336 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 KCNMB3Q9NPA1 279 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 RBM19Q9Y4C8 960 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SCN10AQ9Y5Y9 1956 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SPATA31C2B4DYI2 1134 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SMIM22K7EJ46 135 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PARNO95453 639 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ALAS1P13196 640 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 AKR1A1P14550 325 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 LORP23490 312 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PPP1R2P41236 205 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 CCT2P78371 535 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ARHGAP4P98171 946 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 VAC14Q08AM6 782 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 LAMC2Q13753 1193 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 GNL2Q13823 731 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 CEP55Q53EZ4 464 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 CT47A1Q5JQC4 288 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 FOXD4L5Q5VV16 416 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ARHGEF16Q5VV41 709 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 DDX11Q96FC9 970 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 TINF2Q9BSI4 451 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 POLR3CQ9BUI4 534 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 LRRC2Q9BYS8 371 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 RAVER2Q9HCJ3 691 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 RALGAPA2Q2PPJ7 1873 aa3.71□□□□□ -1.81
SCAMP1-201ENST00000320280 CUTAO60888 179 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 LILRA1O75019 489 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 LGR5O75473 907 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 ATG7O95352 703 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CPA1P15085 419 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 ADORA2AP29274 412 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PTGIRP43119 386 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CPT1AP50416 773 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 RPS6P62753 249 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 FMR1Q06787 632 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PRKG1Q13976 671 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 KANK3Q6NY19 840 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 B3GNT9Q6UX72 402 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 NCAPG2Q86XI2 1143 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TIGD1Q96MW7 591 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SDF4Q9BRK5 362 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 ANP32EQ9BTT0 268 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TEKT3Q9BXF9 490 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 KATNBL1Q9H079 304 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 GDPD2Q9HCC8 539 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 FAM184BQ9ULE4 1060 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CARNS1A5YM72 827 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 DUSP11O75319 330 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 GH1P01241 217 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CYBAP13498 195 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TXLNAP40222 546 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 GJA9P57773 515 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SLC39A14Q15043 492 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SLC4A8Q2Y0W8 1093 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 ARSJQ5FYB0 599 aaPredicted RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TTC38Q5R3I4 469 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 FAM160B1Q5W0V3 765 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TMEM214Q6NUQ4 689 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 Q6ZVU0 165 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PLPPR4Q7Z2D5 763 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 RPAINQ86UA6 219 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CLEC10AQ8IUN9 316 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SPICE1Q8N0Z3 855 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 RMDN3Q96TC7 470 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 NUP88Q99567 741 aaPredicted RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 MYL10Q9BUA6 226 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CCSER1Q9C0I3 900 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 UBA5Q9GZZ9 404 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 EFCC1Q9HA90 598 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SPC25Q9HBM1 224 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 NCOA5Q9HCD5 579 aaKnown RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 FBXO28Q9NVF7 368 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 RCOR1Q9UKL0 485 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 NAP1L2Q9ULW6 460 aaPredicted RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CNPY2Q9Y2B0 182 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 PTPN22Q9Y2R2 807 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 MROH7Q68CQ1 1323 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 TCHHQ07283 1943 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 IGLV3-22A0A075B6J6 115 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 IGKV6D-21A0A0A0MT36 114 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SEPT4O43236 478 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 NEMFO60524 1076 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 MBD3O95983 291 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 OR52Z1P0C646 297 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 GOLGA8HP0CJ92 632 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 MX2P20592 715 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 ENPEPQ07075 957 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SHROOM1Q2M3G4 852 aaPredicted RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 SKOR2Q2VWA4 1001 aaPredicted RBP3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 DUSP28Q4G0W2 176 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 CCDC174Q6PII3 467 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 METTL7BQ6UX53 244 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 DPP9Q86TI2 863 aa3.71□□□□□ -1.82
SCAMP1-201ENST00000320280 ANKRD13CQ8N6S4 541 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms