RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 AZI2Q9H6S1 392 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 ADAMTSL3P82987 1691 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 ANKRD63C9JTQ0 380 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 PIAS1O75925 651 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 KIF4AO95239 1232 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 CDR1P51861 262 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 SETQ01105 290 aaPredicted RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 SWT1Q5T5J6 900 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 GPBP1Q86WP2 473 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MYOCDQ8IZQ8 938 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 GDAP1Q8TB36 358 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 CCDC47Q96A33 483 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 PRMT1Q99873 361 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 FAM167BQ9BTA0 163 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 ZNF804BA4D1E1 1349 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 LOC102724428A0A0B4J2F2 783 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 KRT13P13646 458 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 CHN1P15882 459 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 NR2F2P24468 414 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 ELF1P32519 619 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 CLNS1AP54105 237 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 SIK1P57059 783 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MTM1Q13496 603 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 TRIP13Q15645 432 aaPredicted RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 SLC18A3Q16572 532 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 ARHGAP44Q17R89 818 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 FAM26FQ5R3K3 315 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 DCAF12L1Q5VU92 463 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 PEX26Q7Z412 305 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 PRUNE1Q86TP1 453 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 LRRC34Q8IZ02 419 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 SCFD1Q8WVM8 642 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 RAD54LQ92698 747 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 C18orf8Q96DM3 657 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 UBR2Q8IWV8 1755 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MYH3P11055 1940 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MYH1P12882 1939 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MYH4Q9Y623 1939 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 A0A1W2PQJ5 194 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 TRAPPC3O43617 180 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 ORC4O43929 436 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 VIMP08670 466 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 NF2P35240 595 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 VPS41P49754 854 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 CACNB3P54284 484 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 UBXN2AP68543 259 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 NAIF1Q69YI7 327 aaPredicted RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 ALKBH5Q6P6C2 394 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 C6orf89Q6UWU4 347 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 UNC13DQ70J99 1090 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 CYP2W1Q8TAV3 490 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 HAS1Q92839 578 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 DNAJC19Q96DA6 116 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 ARHGEF26Q96DR7 871 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MRRFQ96E11 262 aaKnown RBP10.51□□□□□ -0.73
RPGR-201ENST00000318842 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 MCM8Q9UJA3 840 aa10.51□□□□□ -0.73
RPGR-201ENST00000318842 LMTK3Q96Q04 1460 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 TISP43B9A030 160 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 SERPING1P05155 500 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 TRIM49P0CI25 452 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 TRIM49CP0CI26 452 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 HNRNPH3P31942 346 aaKnown RBP10.5□□□□□ -0.73
RPGR-201ENST00000318842 ZC2HC1CQ53FD0 456 aaPredicted RBP10.5□□□□□ -0.73
RPGR-201ENST00000318842 HP1BP3Q5SSJ5 553 aaPredicted RBP10.5□□□□□ -0.73
RPGR-201ENST00000318842 ANKRD42Q8N9B4 389 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 SEC63Q9UGP8 760 aaKnown RBP10.5□□□□□ -0.73
RPGR-201ENST00000318842 PALM3A6NDB9 673 aaPredicted RBP10.5□□□□□ -0.73
RPGR-201ENST00000318842 GH1P01241 217 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 PLCG2P16885 1265 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 PPP2R2AP63151 447 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 SNCBQ16143 134 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 C2CD6Q53TS8 623 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 SEMA4AQ9H3S1 761 aa10.5□□□□□ -0.73
RPGR-201ENST00000318842 MED24O75448 989 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 MMEP08473 750 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 HSPA9P38646 679 aaKnown RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 CDK8P49336 464 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 TMC3Q7Z5M5 1100 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 CACNA2D3Q8IZS8 1091 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 FBXO25Q8TCJ0 367 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 PIGOQ8TEQ8 1089 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 KRT35Q92764 455 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 ZMYND12Q9H0C1 365 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 TBK1Q9UHD2 729 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 HDAC9Q9UKV0 1011 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 USP17L10C9JJH3 530 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 CHMP2AO43633 222 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 AKAP3O75969 853 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 LCA5LO95447 670 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 FGRP09769 529 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 UCHL3P15374 230 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 SSTR3P32745 418 aaPredicted RBP10.49□□□□□ -0.73
RPGR-201ENST00000318842 RCAN1P53805 252 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 KRT79Q5XKE5 535 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 IRF2BP2Q7Z5L9 587 aa10.49□□□□□ -0.73
RPGR-201ENST00000318842 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms