RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ENO4A6NNW6 628 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 A8MUI8 341 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 KLRF2D3W0D1 207 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 DIAPH2O60879 1101 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 TDP2O95551 362 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 FGGP02679 453 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 CYP19A1P11511 503 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 SLC9A1P19634 815 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 PRPHP41219 470 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 PPP1R2P41236 205 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 PLTPP55058 493 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 FKBP3Q00688 224 aaKnown RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 LRRC63Q05C16 580 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 MTMR3Q13615 1198 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 C1orf131Q8NDD1 294 aaKnown RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 GLG1Q92896 1179 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 FMO2Q99518 471 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.53□□□□□ -0.723e-8■■■□□ 14.8
PTPRA-202ENST00000318266 KIF9Q9HAQ2 790 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 MAGEF1Q9HAY2 307 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 UTP11Q9Y3A2 253 aaKnown RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 PPP1R12AO14974 1030 aaPredicted RBP10.52□□□□□ -0.72
PTPRA-202ENST00000318266 SLC37A4O43826 429 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 TSPY3P0CV98 308 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 TSPY8P0CW00 308 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 ZNF211Q13398 564 aaPredicted RBP10.52□□□□□ -0.72
PTPRA-202ENST00000318266 CALCRLQ16602 461 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.72
PTPRA-202ENST00000318266 ERMARDQ5T6L9 678 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 AGBL2Q5U5Z8 902 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 ALKBH5Q6P6C2 394 aaKnown RBP10.52□□□□□ -0.72
PTPRA-202ENST00000318266 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 FAM167BQ9BTA0 163 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 FAM129AQ9BZQ8 928 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 KDM4CQ9H3R0 1056 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 AZI2Q9H6S1 392 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 SAMD15Q9P1V8 674 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 SWAP70Q9UH65 585 aa10.52□□□□□ -0.72
PTPRA-202ENST00000318266 COL1A1P02452 1464 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-202ENST00000318266 LAD1O00515 517 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 RTN2O75298 545 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 DNAJC8O75937 253 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-202ENST00000318266 MYBL1P10243 752 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 CAVIN4Q5BKX8 364 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 SPICE1Q8N0Z3 855 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 CARD10Q9BWT7 1032 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 UBA5Q9GZZ9 404 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 STK32BQ9NY57 414 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 MARCH6O60337 910 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 ABCB4P21439 1286 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 DCAF17Q5H9S7 520 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-202ENST00000318266 SOGA3Q5TF21 947 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 OTUD6AQ7L8S5 288 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 MARCH10Q8NA82 808 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-202ENST00000318266 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 INTS9Q9NV88 658 aaKnown RBP10.52□□□□□ -0.73
PTPRA-202ENST00000318266 SNX24Q9Y343 169 aa10.52□□□□□ -0.73
PTPRA-202ENST00000318266 EME2A4GXA9 379 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 SRRM3A6NNA2 597 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 UBOX5O94941 541 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 FGRP09769 529 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 COASYQ13057 564 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 GJB7Q6PEY0 223 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 ARMC9Q7Z3E5 817 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 CCDC26Q8TAB7 109 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 NSUN4Q96CB9 384 aaKnown RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 OSGEPQ9NPF4 335 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 SAP30BPQ9UHR5 308 aaKnown RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 BIRC2Q13490 618 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 ECM1Q16610 540 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 FAM26FQ5R3K3 315 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 SPTY2D1Q68D10 685 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 TRPM8Q7Z2W7 1104 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 KRT25Q7Z3Z0 450 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 C3orf20Q8ND61 904 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 ACTRT1Q8TDG2 376 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 LMBR1Q8WVP7 490 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 PBKQ96KB5 322 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF317Q96PQ6 595 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 NAGPAQ9UK23 515 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 NIP7Q9Y221 180 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTPRA-202ENST00000318266 C15orf41Q9Y2V0 281 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 TNS2Q63HR2 1409 aa10.51□□□□□ -0.73
PTPRA-202ENST00000318266 RGS16O15492 202 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 PAEPP09466 180 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 KRT13P13646 458 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 KCNH2Q12809 1159 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 LLGL1Q15334 1064 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 BZW1Q7L1Q6 419 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 KSR1Q8IVT5 923 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 LRRC57Q8N9N7 239 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 TPCN2Q8NHX9 752 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms