RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ADCY8P40145 1251 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DR1Q01658 176 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DDR1Q08345 913 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 CETN1Q12798 172 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 RCN2Q14257 317 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 TMEM132AQ24JP5 1023 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 ZNF746Q6NUN9 644 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 NSMFQ6X4W1 530 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 APBB1IPQ7Z5R6 666 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 HIPK4Q8NE63 616 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DYDC2Q96IM9 177 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 VCXQ9H320 206 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 PLCB1Q9NQ66 1216 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 KCND1Q9NSA2 647 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 FGFR1OP2Q9NVK5 253 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 SCAF8Q9UPN6 1271 aaKnown RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 CTDP1Q9Y5B0 961 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 IGF2BP3O00425 579 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 WNT7AO00755 349 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 SMTNP53814 917 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 ACCSLQ4AC99 568 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 CFAP157Q5JU67 520 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 ARMC3Q5W041 872 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 HS2ST1Q7LGA3 356 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 NEK8Q86SG6 692 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 LRRC34Q8IZ02 419 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 CFAP61Q8NHU2 1237 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 GLG1Q92896 1179 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 MIEF2Q96C03 454 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DBNDD1Q9H9R9 158 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 SPON1Q9HCB6 807 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 GPR108Q9NPR9 543 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DCTN4Q9UJW0 460 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 REXO2Q9Y3B8 237 aaKnown RBP8.17□□□□□ -1.1
CDHR3-201ENST00000317716 SALL1Q9NSC2 1324 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 GLI3P10071 1580 aa8.17□□□□□ -1.1
CDHR3-201ENST00000317716 DDX39AO00148 427 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SRGNP10124 158 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 CETN2P41208 172 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 KCNB1Q14721 858 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 TNIP1Q15025 636 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 CDKAL1Q5VV42 579 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SRBD1Q8N5C6 995 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 FLAD1Q8NFF5 587 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SPDYE1Q8NFV5 336 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SMC6Q96SB8 1091 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 ARHGAP20Q9P2F6 1191 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 COL4A3BPQ9Y5P4 624 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 PRPF3O43395 683 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 PLCG2P16885 1265 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 YY1P25490 414 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 FKBP3Q00688 224 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 UBE2SQ16763 222 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 USH1GQ495M9 461 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 PAPD7Q5XG87 772 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 KAZNQ674X7 775 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 KCNV1Q6PIU1 500 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 PNPLA7Q6ZV29 1317 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 UBL4BQ8N7F7 174 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 CUL5Q93034 780 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 LRRC27Q9C0I9 530 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 ZCWPW1Q9H0M4 648 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 ALG13Q9NP73 1137 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 TMEM260Q9NX78 707 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 ZNF233A6NK53 670 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SPAG7O75391 227 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 BAG3O95817 575 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SERPING1P05155 500 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 HIBADHP31937 336 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 SP4Q02446 784 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 TCP10Q12799 353 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 DPP8Q6V1X1 898 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 TMTC3Q6ZXV5 915 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 FUKQ8N0W3 1084 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 MYCT1Q8N699 235 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 DDX12PQ92771 950 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 XPO6Q96QU8 1125 aaKnown RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 MED15Q96RN5 788 aa8.16□□□□□ -1.1
CDHR3-201ENST00000317716 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-201ENST00000317716 ABCC12Q96J65 1359 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 AGPSO00116 658 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 EXOC3O60645 756 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 PRPF6O94906 941 aaKnown RBP8.15□□□□□ -1.1
CDHR3-201ENST00000317716 ITGA4P13612 1032 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 VEGFAP15692 232 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-201ENST00000317716 KCNJ1P48048 391 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 ATP2C1P98194 919 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-201ENST00000317716 GRM1Q13255 1194 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 PSMD6Q15008 389 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 NTRK3Q16288 839 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 LONRF1Q17RB8 773 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 ANKRD20A3Q5VUR7 823 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 KRT25Q7Z3Z0 450 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 SGMS1Q86VZ5 419 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 MMGT1Q8N4V1 131 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 FAM118BQ9BPY3 351 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 ZNF287Q9HBT7 754 aa8.15□□□□□ -1.1
CDHR3-201ENST00000317716 PCDHA4Q9UN74 947 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms