RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 PPIP5K2O43314 1243 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 NOL4O94818 638 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 MYZAPP0CAP1 466 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 PDIA5Q14554 519 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 VPS36Q86VN1 386 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 GRID2IPA4D2P6 1211 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 GDF11O95390 407 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 GLE1Q53GS7 698 aaKnown RBP16.28■□□□□ 0.2
TFE3-201ENST00000315869 ASPRV1Q53RT3 343 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 GJB7Q6PEY0 223 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 DNAJC19Q96DA6 116 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 MYO1FO00160 1098 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 PJA2O43164 708 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 GCNT3O95395 438 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
TFE3-201ENST00000315869 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.28e-7■■■■■ 81.7
TFE3-201ENST00000315869 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 PNMA6FA0A0J9YX94 578 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 SHOX2O60902 331 aaPredicted RBP16.28■□□□□ 0.2
TFE3-201ENST00000315869 APOBEC3HQ6NTF7 200 aaKnown RBP16.28■□□□□ 0.2
TFE3-201ENST00000315869 HAS1Q92839 578 aa16.28■□□□□ 0.2
TFE3-201ENST00000315869 GFPT2O94808 682 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 ITIH3Q06033 890 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 PLS1Q14651 629 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 C15orf52Q6ZUT6 534 aaKnown RBP16.27■□□□□ 0.2
TFE3-201ENST00000315869 SFR1Q86XK3 245 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 RIOX1Q9H6W3 641 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
TFE3-201ENST00000315869 RNF14Q9UBS8 474 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 GRIN2DO15399 1336 aa16.27■□□□□ 0.2
TFE3-201ENST00000315869 GOLGA6L7A0A1B0GV03 622 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.19
TFE3-201ENST00000315869 CHMP2AO43633 222 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 KRT71Q3SY84 523 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 SLC30A10Q6XR72 485 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 MMS22LQ6ZRQ5 1243 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 MICALCLQ6ZW33 695 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 UHMK1Q8TAS1 419 aaKnown RBP16.27■□□□□ 0.19
TFE3-201ENST00000315869 CAVIN3Q969G5 261 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.19
TFE3-201ENST00000315869 SART1O43290 800 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 GNA14O95837 355 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 TMOD1P28289 359 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 CDC37Q16543 378 aaPredicted RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 ASTE1Q2TB18 679 aaPredicted RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 USP38Q8NB14 1042 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 RDH13Q8NBN7 331 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 ATP6V1G3Q96LB4 118 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 SH3GL2Q99962 352 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 DAPK3O43293 454 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 KIF4AO95239 1232 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 TTLL1O95922 423 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 CASP5P51878 434 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 HDLBPQ00341 1268 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 ZNF571Q7Z3V5 609 aaPredicted RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 TRIM59Q8IWR1 403 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 IPO4Q8TEX9 1081 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 KAT2BQ92831 832 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 TMEM110-MUSTN1A8MSY1 372 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 PPP1R37O75864 691 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 FLOT1O75955 427 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 H2AFZP0C0S5 128 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 PSMC6P62333 389 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 H2AFVQ71UI9 128 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 EDEM3Q9BZQ6 932 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 CCDC113Q9H0I3 377 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 TAF1DQ9H5J8 278 aaPredicted RBP16.26■□□□□ 0.19
TFE3-201ENST00000315869 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
TFE3-201ENST00000315869 LCA5LO95447 670 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ITGA4P13612 1032 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 UCHL3P15374 230 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 CYP11B2P19099 503 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 LLGL1Q15334 1064 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 IQCKQ8N0W5 287 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 CEP63Q96MT8 703 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 CCT8L2Q96SF2 557 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 NOVA2Q9UNW9 492 aaKnown RBP16.25■□□□□ 0.19
TFE3-201ENST00000315869 KDM3AQ9Y4C1 1321 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 AFPP02771 609 aaKnown RBP16.25■□□□□ 0.19
TFE3-201ENST00000315869 COPB2P35606 906 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ZNF543Q08ER8 600 aa16.25■□□□□ 0.19
TFE3-201ENST00000315869 ARHGAP44Q17R89 818 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms