RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 GLE1Q53GS7 698 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 VSIG1Q86XK7 387 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 GRAMD1CQ8IYS0 662 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 NSUN7Q8NE18 718 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 MAGOHBQ96A72 148 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CCDC42Q96M95 316 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CHP1Q99653 195 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 INTS13Q9NVM9 706 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 SLC4A8Q2Y0W8 1093 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 PPP4R3AQ6IN85 833 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CCDC80Q76M96 950 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 LCA5Q86VQ0 697 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 TAF6LQ9Y6J9 622 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 USP17L21D6R901 530 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CACNB3P54284 484 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 KCNJ2P63252 427 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 IGBP1P78318 339 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 RCN2Q14257 317 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 POSTNQ15063 836 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 P3H1Q32P28 736 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 SLC44A4Q53GD3 710 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 TRAPPC11Q7Z392 1133 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CCDC51Q96ER9 411 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 DYDC2Q96IM9 177 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 MOV10L1Q9BXT6 1211 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 ARPP21Q9UBL0 812 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 FOXN1O15353 648 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 CARSP49589 748 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 SAFBQ15424 915 aaKnown RBP eCLIP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 TBC1D10BQ4KMP7 808 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 MAP7D3Q8IWC1 876 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 TAF1DQ9H5J8 278 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZMYM6O95789 1325 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 MYH2Q9UKX2 1941 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 LSM1O15116 133 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 TMCC1O94876 653 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 STAT6P42226 847 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 ALDH5A1P51649 535 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 FMR1Q06787 632 aaKnown RBP eCLIP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 SPATA4Q8NEY3 305 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 TAF4BQ92750 862 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 LZTS2Q9BRK4 669 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 FLT1P17948 1338 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 DNAJC8O75937 253 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 NQO1P15559 274 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 AENQ8WTP8 325 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 KRT12Q99456 494 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 LLPHQ9BRT6 129 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
LDLRAD3-201ENST00000315571 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 E2F6O75461 281 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 RALYLQ86SE5 291 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 GPRC5DQ9NZD1 345 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 EHD2Q9NZN4 543 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 TCP10Q12799 353 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 SMYD4Q8IYR2 804 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 LRRC45Q96CN5 670 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 FAM81BQ96LP2 452 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 ZC3H4Q9UPT8 1303 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 CYP2D7A0A087X1C5 515 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 HNRNPRO43390 633 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 NLRP5P59047 1200 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 COG7P83436 770 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 TRPM8Q7Z2W7 1104 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 CARD9Q9H257 536 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 SLC5A4Q9NY91 659 aa12.68□□□□□ -0.38
LDLRAD3-201ENST00000315571 A8MUI8 341 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 OPHN1O60890 802 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 GSTT1P30711 240 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 PDE1CQ14123 709 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
LDLRAD3-201ENST00000315571 PHC3Q8NDX5 983 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms