RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 TDRKHQ9Y2W6 561 aaKnown RBP10.05□□□□□ -0.8
BDNF-201ENST00000314915 ANO9A1A5B4 782 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 SH3PXD2BA1X283 911 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 PEX11AO75192 247 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
BDNF-201ENST00000314915 GLI1P08151 1106 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 CDK4P11802 303 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 ETS2P15036 469 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 COG2Q14746 738 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 C10orf76Q5T2E6 689 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 RIBC1Q8N443 379 aaPredicted RBP10.05□□□□□ -0.8
BDNF-201ENST00000314915 LRRC8CQ8TDW0 803 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 COG3Q96JB2 828 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 DDX23Q9BUQ8 820 aaKnown RBP10.05□□□□□ -0.8
BDNF-201ENST00000314915 HAUS4Q9H6D7 363 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 GPR108Q9NPR9 543 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 NMRK1Q9NWW6 199 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
BDNF-201ENST00000314915 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.05□□□□□ -0.8
BDNF-201ENST00000314915 CUL7Q14999 1698 aa10.05□□□□□ -0.8
BDNF-201ENST00000314915 BCL9O00512 1426 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 H3BQV1 296 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 MAGEB3O15480 346 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PLCG2P16885 1265 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 EMP3P54852 163 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 RTP1P59025 263 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ANKRD1Q15327 319 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 GALNTL6Q49A17 601 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PDXDC1Q6P996 788 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.8
BDNF-201ENST00000314915 ERP27Q96DN0 273 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 COX4I2Q96KJ9 171 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PSTPIP2Q9H939 334 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 POLD4Q9HCU8 107 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CEMIPQ8WUJ3 1361 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PASKQ96RG2 1323 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PTCH1Q13635 1447 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ZNF254O75437 659 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CHKAP35790 457 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 FAM129AQ9BZQ8 928 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CCDC177Q9NQR7 707 aaPredicted RBP10.04□□□□□ -0.8
BDNF-201ENST00000314915 KLF15Q9UIH9 416 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 MKL2Q9ULH7 1088 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 KIAA0232Q92628 1395 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 IQGAP2Q13576 1575 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 A0A088AWK7 358 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 A0A1W2PQ27 194 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 A0A1W2PQ64 194 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ANKRD34BA5PLL1 514 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CES1P23141 567 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 DSTNP60981 165 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PLS1Q14651 629 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PCSK7Q16549 785 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 MAP3K21Q5TCX8 1036 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ARHGEF18Q6ZSZ5 1173 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ASRGL1Q7L266 308 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
BDNF-201ENST00000314915 FMR1NBQ8N0W7 255 aaPredicted RBP10.04□□□□□ -0.8
BDNF-201ENST00000314915 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CEP70Q8NHQ1 597 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ATL1Q8WXF7 558 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CDKL2Q92772 493 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 LTV1Q96GA3 475 aaPredicted RBP10.04□□□□□ -0.8
BDNF-201ENST00000314915 PBKQ96KB5 322 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 ERP44Q9BS26 406 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 SCAF8Q9UPN6 1271 aaKnown RBP10.04□□□□□ -0.8
BDNF-201ENST00000314915 TBC1D30Q9Y2I9 924 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
BDNF-201ENST00000314915 EFCAB6Q5THR3 1501 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 MYO5CQ9NQX4 1742 aa10.04□□□□□ -0.8
BDNF-201ENST00000314915 CNOT3O75175 753 aaKnown RBP10.03□□□□□ -0.8
BDNF-201ENST00000314915 LARGE1O95461 756 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 NIPAL4Q0D2K0 466 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 FYB2Q5VWT5 728 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 LILRB2Q8N423 598 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 NELFBQ8WX92 580 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 SGCDQ92629 289 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 CAPZA3Q96KX2 299 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 PPP1R10Q96QC0 940 aaKnown RBP10.03□□□□□ -0.8
BDNF-201ENST00000314915 SEMA4AQ9H3S1 761 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 C12orf10Q9HB07 376 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 PIK3CDO00329 1044 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 KRT75O95678 551 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 A1BGP04217 495 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 ME1P48163 572 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 B2MP61769 119 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 RESTQ13127 1097 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 NONOQ15233 471 aaKnown RBP eCLIP10.03□□□□□ -0.8
BDNF-201ENST00000314915 ERMARDQ5T6L9 678 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 ASIC4Q96FT7 647 aa10.03□□□□□ -0.8
BDNF-201ENST00000314915 UROC1Q96N76 676 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms