RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 A0A1W2PRG0 241 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MFAP3P55082 362 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 NPEPPSP55786 919 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 KCTD16Q68DU8 428 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 PACSIN2Q9UNF0 486 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 EIF3CLB5ME19 914 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 TMEM191BP0C7N4 346 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MDM2Q00987 491 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 FUT2Q10981 343 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 ZNF384Q8TF68 577 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 EIF3CQ99613 913 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 ATP8B1O43520 1251 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 RPA1P27694 616 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 QARSP47897 775 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MTMR2Q13614 643 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 FAM160B1Q5W0V3 765 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 NYAP1Q6ZVC0 841 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 APOBEC3HQ6NTF7 200 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 THNSL1Q8IYQ7 743 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 NSUN6Q8TEA1 469 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 CTNNA1P35221 906 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 SARSP49591 514 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 KRT71Q3SY84 523 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 HAUS6Q7Z4H7 955 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 SH3RF1Q7Z6J0 888 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 GLYCTKQ8IVS8 523 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 KSR1Q8IVT5 923 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 AP1M1Q9BXS5 423 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 IVLP07476 585 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MXI1P50539 228 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 CEP85LQ5SZL2 805 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 ATG4CQ96DT6 458 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 SAAL1Q96ER3 474 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 CNOT7Q9UIV1 285 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MRFAP1Q9Y605 127 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 PDXKO00764 312 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 PALMO75781 387 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 PMS1P54277 932 aaKnown RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 CPLX4Q7Z7G2 160 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 PNMA5Q96PV4 448 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 INO80B-WBP1J3KQ70 363 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 LMNB1P20700 586 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 BMP6P22004 513 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 STXBP2Q15833 593 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 TTC19Q6DKK2 380 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 XXYLT1Q8NBI6 393 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 OTUD5Q96G74 571 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 INO80BQ9C086 356 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 K7ERI5 159 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 ATP1A2P50993 1020 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 JAK3P52333 1124 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 MSANTD4Q8NCY6 345 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 ATP2A1O14983 1001 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 TNNC2P02585 160 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 NR3C2P08235 984 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 SEMA3FQ13275 785 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 SNX1Q13596 522 aa6.73□□□□□ -1.33
PRKDC-201ENST00000314191 TAB3Q8N5C8 712 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 FAM163AQ96GL9 167 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-201ENST00000314191 EBAG9O00559 213 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 PSAPP07602 524 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 PIK3CAP42336 1068 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 PSMC6P62333 389 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 CASP8Q14790 479 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 KCNG1Q9UIX4 513 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 PNMA6AP0CW24 399 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-201ENST00000314191 KCNJ6P48051 423 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 KCNK18Q7Z418 384 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 CDHR1Q96JP9 859 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 NDUFAB1O14561 156 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 ZNF18P17022 549 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 CYP11B2P19099 503 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 KRT76Q01546 638 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 CXCL9Q07325 125 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 ITIH6Q6UXX5 1313 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 TBX3O15119 743 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 ZNF394Q53GI3 561 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 BBXQ8WY36 941 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-201ENST00000314191 MMS19Q96T76 1030 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 MRC1P22897 1456 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 DENND3A2RUS2 1198 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 MARK3P27448 753 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 HDLBPQ00341 1268 aaKnown RBP6.72□□□□□ -1.33
PRKDC-201ENST00000314191 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 GSPT2Q8IYD1 628 aaKnown RBP6.72□□□□□ -1.33
PRKDC-201ENST00000314191 ZNF185O15231 689 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 THAP12O43422 761 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 HOXA7P31268 230 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-201ENST00000314191 C10orf67Q8IYJ2 551 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 ANKS1AQ92625 1134 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 FAM204AQ9H8W3 233 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 FAM237AA0A1B0GTK4 181 aa6.72□□□□□ -1.33
PRKDC-201ENST00000314191 CAP2P40123 477 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms