RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 MARCH8Q5T0T0 291 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 PPP1R18Q6NYC8 613 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 SKAP1Q86WV1 359 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 ZNF713Q8N859 430 aaPredicted RBP9.3□□□□□ -0.92
TPM3-203ENST00000312970 CYP2W1Q8TAV3 490 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 DNAJB3Q8WWF6 145 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 TCEANC2Q96MN5 208 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 SDF4Q9BRK5 362 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 AZI2Q9H6S1 392 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
TPM3-203ENST00000312970 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 TUBE1Q9UJT0 475 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 MICAL3Q7RTP6 2002 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 NFASCO94856 1347 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 CNTNAP5Q8WYK1 1306 aa9.3□□□□□ -0.92
TPM3-203ENST00000312970 WDR87Q6ZQQ6 2873 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.29□□□□□ -0.92
TPM3-203ENST00000312970 KLF18A0A0U1RQI7 1052 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 GOLGA8AA7E2F4 631 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 GOLGA8BA8MQT2 603 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 H3BNC9 293 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 STXBP3O00186 592 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 MEIS1O00470 390 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 ENPP3O14638 875 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 CDC45O75419 566 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 RPLP2P05387 115 aaKnown RBP9.29□□□□□ -0.92
TPM3-203ENST00000312970 ARP10275 920 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 GHRP10912 638 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 INSRRP14616 1297 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 ZNF76P36508 570 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 MRE11P49959 708 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 STAT5BP51692 787 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 RCAN1P53805 252 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 ACTR2P61160 394 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 IGBP1P78318 339 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 FGD1P98174 961 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 MGAT3Q09327 533 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 GPM6BQ13491 265 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 LPIN1Q14693 890 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 PTPROQ16827 1216 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 CEP55Q53EZ4 464 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 IER5Q5VY09 327 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 PLPPR4Q7Z2D5 763 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 TMEM192Q8IY95 271 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 MRPL38Q96DV4 380 aaKnown RBP9.29□□□□□ -0.92
TPM3-203ENST00000312970 IL17RAQ96F46 866 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 SNX27Q96L92 541 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 PCYT2Q99447 389 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 ANO3Q9BYT9 981 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
TPM3-203ENST00000312970 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 SPTBN4Q9H254 2564 aa9.29□□□□□ -0.92
TPM3-203ENST00000312970 NLRC5Q86WI3 1866 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 ATG7O95352 703 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 CDC27P30260 824 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 SREBF1P36956 1147 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 MRPS6P82932 125 aaKnown RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 AP3B2Q13367 1082 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 FBXO47Q5MNV8 452 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 MCTP2Q6DN12 878 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 TSHZ1Q6ZSZ6 1077 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 NIPA1Q7RTP0 329 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 NME8Q8N427 588 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 FIBCD1Q8N539 461 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 ZNF579Q8NAF0 562 aaKnown RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 PGBD1Q96JS3 809 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 UBE2ZQ9H832 354 aaPredicted RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 AGO4Q9HCK5 861 aaKnown RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 TMEM260Q9NX78 707 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 NAP1L2Q9ULW6 460 aaPredicted RBP9.28□□□□□ -0.92
TPM3-203ENST00000312970 TRPC6Q9Y210 931 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 PCDHA2Q9Y5H9 948 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 CDY2AQ9Y6F7 541 aa9.28□□□□□ -0.92
TPM3-203ENST00000312970 MYO15AQ9UKN7 3530 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 POTEB3A0JP26 581 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 M0QZ92 97 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 GPR37O15354 613 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 RB1P06400 928 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 BMPR1AP36894 532 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 SLC26A2P50443 739 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 METAP2P50579 478 aaKnown RBP eCLIP9.27□□□□□ -0.93
TPM3-203ENST00000312970 ITGB3BPQ13352 177 aaPredicted RBP9.27□□□□□ -0.93
TPM3-203ENST00000312970 PLCB4Q15147 1175 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 PFKFB3Q16875 520 aaPredicted RBP9.27□□□□□ -0.93
TPM3-203ENST00000312970 JAKMIP3Q5VZ66 844 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 POTEBQ6S5H4 581 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 Q6ZUG5 572 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 KCNB2Q92953 911 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 CELF4Q9BZC1 486 aaKnown RBP9.27□□□□□ -0.93
TPM3-203ENST00000312970 FAM49AQ9H0Q0 323 aaPredicted RBP9.27□□□□□ -0.93
TPM3-203ENST00000312970 C6orf50Q9HD87 102 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 RWDD3Q9Y3V2 267 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 DMDP11532 3685 aa9.27□□□□□ -0.93
TPM3-203ENST00000312970 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
TPM3-203ENST00000312970 IGKV6D-21A0A0A0MT36 114 aa9.26□□□□□ -0.93
TPM3-203ENST00000312970 SMIM35A0A1B0GVV1 85 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms