RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 POTEBQ6S5H4 581 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 TPH2Q8IWU9 490 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 KCTD17Q8N5Z5 321 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 ATP8B4Q8TF62 1192 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 RNPEPQ9H4A4 650 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 ZNF215Q9UL58 517 aaPredicted RBP14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 HPSEQ9Y251 543 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 FRMPD3Q5JV73 1810 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 GRIN2DO15399 1336 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 KDM3AQ9Y4C1 1321 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 A0A087X0B3 334 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 A0A1W2PQ45 241 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 A0A1W2PQY0 241 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 GADD45BO75293 160 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 OATP04181 439 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 COL6A1P12109 1028 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 MARK3P27448 753 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 MFSD10Q14728 455 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 XKR3Q5GH77 459 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 LRRC15Q8TF66 581 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 FAM167AQ96KS9 214 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 KATNAL1Q9BW62 490 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 NIFKQ9BYG3 293 aaKnown RBP14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 NT5C3AQ9H0P0 336 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 KIAA1024Q9UPX6 916 aa14.16□□□□□ -0.14
CHMP2A-201ENST00000312547 PRPF40AO75400 957 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 HOXC8P31273 242 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 TXLNAP40222 546 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 PSMC6P62333 389 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 E2F4Q16254 413 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 KIAA0753Q2KHM9 967 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 ANO5Q75V66 913 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 KCNK18Q7Z418 384 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 SESTD1Q86VW0 696 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 FSIP1Q8NA03 581 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 BBXQ8WY36 941 aaPredicted RBP14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 MRPS27Q92552 414 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 GLT1D1Q96MS3 346 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 NACC1Q96RE7 527 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 GOLPH3LQ9H4A5 285 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 LMBRD1Q9NUN5 540 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 FAM13BQ9NYF5 915 aa14.15□□□□□ -0.14
CHMP2A-201ENST00000312547 TCHHQ07283 1943 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 ZBTB42B2RXF5 422 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 ZBTB39O15060 712 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 HBP1O60381 514 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 PFKFB1P16118 471 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 PLCG1P19174 1290 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 YWHABP31946 246 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 UBE2HP62256 183 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 TARBP2Q15633 366 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 NBPF20Q3BBV1 942 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 CCDC73Q6ZRK6 1079 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 UBE2Q1Q7Z7E8 422 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 PIGOQ8TEQ8 1089 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 CEP89Q96ST8 783 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 BLOC1S4Q9NUP1 217 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 KCNH3Q9ULD8 1083 aa14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 KIAA0100Q14667 2235 aaKnown RBP14.14□□□□□ -0.15
CHMP2A-201ENST00000312547 A0A087WWV3 80 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 DDX11L8A8MPP1 907 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 E9PMD0 336 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 SMIM10L2AP0DMW4 78 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 SMIM10L2BP0DMW5 78 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 INSRRP14616 1297 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 EN2P19622 333 aaPredicted RBP14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 RARRES1P49788 294 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 NDUFA8P51970 172 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 ADAM17P78536 824 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 ITGA7Q13683 1181 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 ZRSR1Q15695 479 aaKnown RBP14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 ZNF484Q5JVG2 852 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 RRAGBQ5VZM2 374 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 ENGASEQ8NFI3 743 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 CDK5RAP3Q96JB5 506 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 PLIN2Q99541 437 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 PANK2Q9BZ23 570 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 DNM3Q9UQ16 869 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 PPME1Q9Y570 386 aa14.13□□□□□ -0.15
CHMP2A-201ENST00000312547 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms