RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TJP3O95049 919 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 ARHGDIAP52565 204 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 TAF1BQ53T94 588 aaPredicted RBP14.69□□□□□ -0.06
CLCN6-201ENST00000312413 OR6B2Q6IFH4 312 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLCN6-201ENST00000312413 SMYD3Q9H7B4 428 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 ETNK1Q9HBU6 452 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 MEIS1O00470 390 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 CAV1Q03135 178 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 RESP18Q5W5W9 173 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
CLCN6-201ENST00000312413 ZNF408Q9H9D4 720 aa14.69□□□□□ -0.06
CLCN6-201ENST00000312413 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 LGALS16A8MUM7 142 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 ADD2P35612 726 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 ABCB5Q2M3G0 1257 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 ANO5Q75V66 913 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 VPS39Q96JC1 886 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 PUS3Q9BZE2 481 aaKnown RBP14.68□□□□□ -0.06
CLCN6-201ENST00000312413 SNX5Q9Y5X3 404 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 LPXNO60711 386 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 ZBTB41Q5SVQ8 909 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 RGS9BPQ6ZS82 235 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 NIM1KQ8IY84 436 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 MRPL40Q9NQ50 206 aaKnown RBP14.68□□□□□ -0.06
CLCN6-201ENST00000312413 SLC5A4Q9NY91 659 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 SYCE1LA8MT33 242 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 TFAMQ00059 246 aaKnown RBP14.68□□□□□ -0.06
CLCN6-201ENST00000312413 RNF207Q6ZRF8 634 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 GSPT2Q8IYD1 628 aaKnown RBP14.68□□□□□ -0.06
CLCN6-201ENST00000312413 GREM2Q9H772 168 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 PZPP20742 1482 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 MYOM2P54296 1465 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 PMS2P54278 862 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 KIF19Q2TAC6 998 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 TBC1D10BQ4KMP7 808 aaPredicted RBP14.68□□□□□ -0.06
CLCN6-201ENST00000312413 FAM47CQ5HY64 1035 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 TTC25Q96NG3 672 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 TRPV6Q9H1D0 765 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 NDE1Q9NXR1 346 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 CEP72Q9P209 647 aa14.68□□□□□ -0.06
CLCN6-201ENST00000312413 ZNF233A6NK53 670 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 ZBTB24O43167 697 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 LIFRP42702 1097 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 STAT2P52630 851 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 DHX38Q92620 1227 aaKnown RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 PIGSQ96S52 555 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 BPIFA3Q9BQP9 254 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 NXF1Q9UBU9 619 aaKnown RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 INO80B-WBP1J3KQ70 363 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 PPIP5K2O43314 1243 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 TTLL1O95922 423 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 TAC1P20366 129 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 FAF2Q96CS3 445 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 ATP6V1G3Q96LB4 118 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 INO80BQ9C086 356 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 KLC2Q9H0B6 622 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 SNX25Q9H3E2 840 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 KLC4Q9NSK0 619 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 WDR64B1ANS9 1081 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 SCNN1DP51172 638 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 NECTIN1Q15223 517 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 KRT39Q6A163 491 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 ACAD11Q709F0 780 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 FAM193BQ96PV7 902 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 RPS6KC1Q96S38 1066 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 ECT2Q9H8V3 914 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 KDM5DQ9BY66 1539 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 RAD23BP54727 409 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 IGBP1P78318 339 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 YWHAHQ04917 246 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 KLHL38Q2WGJ6 581 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 BZW1Q7L1Q6 419 aaKnown RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 RYBPQ8N488 228 aaPredicted RBP14.67□□□□□ -0.06
CLCN6-201ENST00000312413 BTBD6Q96KE9 485 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 CEP170P1Q96L14 293 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 GDAQ9Y2T3 454 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 H3BRJ5 948 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 BRAFP15056 766 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 UBXN2AP68543 259 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 TRIM59Q8IWR1 403 aa14.67□□□□□ -0.06
CLCN6-201ENST00000312413 E2F6O75461 281 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 EPHB1P54762 984 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 FAM161BQ96MY7 647 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 AIFM3Q96NN9 605 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 NBPF3Q9H094 633 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 USP14P54578 494 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 ALCAMQ13740 583 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 NAA30Q147X3 362 aaPredicted RBP14.66□□□□□ -0.06
CLCN6-201ENST00000312413 STAMBPL1Q96FJ0 436 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 RBM41Q96IZ5 413 aaKnown RBP14.66□□□□□ -0.06
CLCN6-201ENST00000312413 ZBTB18Q99592 522 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 ZSWIM5Q9P217 1185 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 CSADQ9Y600 493 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 RNF103-CHMP3A0A140T963 221 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 KPNA7A9QM74 516 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 ZRANB2O95218 330 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLCN6-201ENST00000312413 DDIT3P35638 169 aa14.66□□□□□ -0.06
CLCN6-201ENST00000312413 RANBP1P43487 201 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms