RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 PNMA6FA0A0J9YX94 578 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 E4F1Q66K89 784 aaPredicted RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 RAB44Q7Z6P3 723 aaPredicted RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 WDR24Q96S15 920 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 THRAP3Q9Y2W1 955 aaKnown RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 MEFVO15553 781 aaPredicted RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 TRIM56Q9BRZ2 755 aaKnown RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 BRIP1Q9BX63 1249 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 CCPG1Q9ULG6 757 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 ITIH6Q6UXX5 1313 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 TTC26A0AVF1 554 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 CHRNA3P32297 505 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNED1-201ENST00000310397 HDAC11Q96DB2 347 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 KMT5AQ9NQR1 393 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 BATF3Q9NR55 127 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 PVALEFA0A1B0GWK0 134 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 PHEXP78562 749 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 KSR1Q8IVT5 923 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 CDHR1Q96JP9 859 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 FAM187AA6NFU0 413 aa14.15□□□□□ -0.14
SNED1-201ENST00000310397 HNRNPCL1O60812 293 aaKnown RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 PFKFB3Q16875 520 aaPredicted RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 BZW1Q7L1Q6 419 aaKnown RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 SRRM1Q8IYB3 904 aaKnown RBP14.15□□□□□ -0.14
SNED1-201ENST00000310397 M0QZ92 97 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 CHGBP05060 677 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 RSBN1LQ6PCB5 846 aaPredicted RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 RFX1P22670 979 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 DYNC1I2Q13409 638 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 ALAS1P13196 640 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 PMS2P54278 862 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 ADCY1Q08828 1119 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 DHX34Q14147 1143 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 NCAPGQ9BPX3 1015 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 TLK1Q9UKI8 766 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 PFASO15067 1338 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 LRRC53A6NM62 1247 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 SAT1P21673 171 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 KCNB1Q14721 858 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 CNPY4Q8N129 248 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 PIP4K2CQ8TBX8 421 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 SLC7A3Q8WY07 619 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 RBM41Q96IZ5 413 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 ZRANB2O95218 330 aaKnown RBP eCLIP14.14□□□□□ -0.15
SNED1-201ENST00000310397 AP2B1P63010 937 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 CCZ1BP86790 482 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 CCZ1P86791 482 aaPredicted RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 DARS2Q6PI48 645 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 ANKRD65E5RJM6 399 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 STAT2P52630 851 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 GPC5P78333 572 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 ALX1Q15699 326 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 FAM160B1Q5W0V3 765 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 EIF2AQ9BY44 585 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 WDR46O15213 610 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 TOM1L1O75674 476 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 GRAMD1BQ3KR37 738 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 YY1AP1Q9H869 796 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 MLXIPQ9HAP2 919 aa14.14□□□□□ -0.15
SNED1-201ENST00000310397 MRPL40Q9NQ50 206 aaKnown RBP14.14□□□□□ -0.15
SNED1-201ENST00000310397 USP42Q9H9J4 1324 aaKnown RBP14.13□□□□□ -0.15
SNED1-201ENST00000310397 MDM2Q00987 491 aaPredicted RBP14.13□□□□□ -0.15
SNED1-201ENST00000310397 SURF1Q15526 300 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 ARHGAP18Q8N392 663 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 LARGE2Q8N3Y3 721 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 MCAMP43121 646 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 TTC13Q8NBP0 860 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 CALN1Q9BXU9 219 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 SNX12Q9UMY4 172 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 HDLBPQ00341 1268 aaKnown RBP14.13□□□□□ -0.15
SNED1-201ENST00000310397 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
SNED1-201ENST00000310397 GFPT1Q06210 699 aaPredicted RBP14.13□□□□□ -0.15
SNED1-201ENST00000310397 SGMS1Q86VZ5 419 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 A0A1B0GTH6 734 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 KCNH2Q12809 1159 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 FSCBQ5H9T9 825 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 FAM83BQ5T0W9 1011 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 SENP1Q9P0U3 644 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 ZFP69BQ9UJL9 534 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 EIF3HO15372 352 aaKnown RBP eCLIP14.13□□□□□ -0.15
SNED1-201ENST00000310397 PRKAB2O43741 272 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 PPP1R37O75864 691 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 GUF1Q8N442 669 aaKnown RBP14.13□□□□□ -0.15
SNED1-201ENST00000310397 MED10Q9BTT4 135 aa14.13□□□□□ -0.15
SNED1-201ENST00000310397 ARL4CP56559 192 aa14.12□□□□□ -0.15
SNED1-201ENST00000310397 UBN2Q6ZU65 1347 aa14.12□□□□□ -0.15
SNED1-201ENST00000310397 USP17L2Q6R6M4 530 aa14.12□□□□□ -0.15
SNED1-201ENST00000310397 TRIM15Q9C019 465 aa14.12□□□□□ -0.15
SNED1-201ENST00000310397 WNT8AQ9H1J5 351 aa14.12□□□□□ -0.15
SNED1-201ENST00000310397 SMYD2Q9NRG4 433 aa14.12□□□□□ -0.15
SNED1-201ENST00000310397 SEPT9Q9UHD8 586 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms