RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 TTLL4Q14679 1199 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 ODF2Q5BJF6 829 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 DEPTORQ8TB45 409 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 SLC7A3Q8WY07 619 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 NRXN2Q9P2S2 1712 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 AKAP11Q9UKA4 1901 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 YDJCA8MPS7 323 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 IPO5O00410 1097 aaKnown RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TACC1O75410 805 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 GCNT3O95395 438 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 VEGFAP15692 232 aaPredicted RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 COPB1P53618 953 aaKnown RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 KMT5BQ4FZB7 885 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 SLC9C1Q4G0N8 1177 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 XKR9Q5GH70 373 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 WDR44Q5JSH3 913 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TCERG1LQ5VWI1 586 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TTC39CQ8N584 583 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC42Q96M95 316 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 MKNK1Q9BUB5 465 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 UBAP1Q9NZ09 502 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 DBR1Q9UK59 544 aaKnown RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 PCDHA10Q9Y5I2 948 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 KIAA1551Q9HCM1 1747 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 BRWD3Q6RI45 1802 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 PDXKO00764 312 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 STRNO43815 780 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ERLIN2O94905 339 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 P4HA1P13674 534 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 HOXD10P28358 340 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 MAP3K10Q02779 954 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TERF2Q15554 542 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TSHZ1Q6ZSZ6 1077 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 AMIGO3Q86WK7 504 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC170Q8IYT3 715 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ARMC2Q8NEN0 867 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 OR8K1Q8NGG5 319 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ZNF384Q8TF68 577 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 MMP19Q99542 508 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 MIS12Q9H081 205 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 JADE2Q9NQC1 790 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 LAMB1P07942 1786 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 NDC80O14777 642 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ATP2A1O14983 1001 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ASAP2O43150 1006 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 AKR1B10O60218 316 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 GNAT1P11488 350 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 RWDD2BP57060 319 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 BPIFB4P59827 614 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 KIF5AQ12840 1032 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 POTEDQ86YR6 584 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 CEP112Q8N8E3 955 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 CAGE1Q8TC20 777 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 CTNNBL1Q8WYA6 563 aaPredicted RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TNFRSF25Q93038 417 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TRIM11Q96F44 468 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 EPSTI1Q96J88 318 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 RPGRIP1Q96KN7 1286 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 ATP6V0A4Q9HBG4 840 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 SLC38A10Q9HBR0 1119 aa6.56□□□□□ -1.36
SEC22A-201ENST00000309934 TYW1Q9NV66 732 aaKnown RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 LIMA1Q9UHB6 759 aaKnown RBP6.56□□□□□ -1.36
SEC22A-201ENST00000309934 XPOTO43592 962 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CHMP2AO43633 222 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MAPK4P31152 587 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 EFNA5P52803 228 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 PPP2R5CQ13362 524 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 PRPF4BQ13523 1007 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 LRRC23Q53EV4 343 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 TDRD12Q587J7 1177 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 XKR3Q5GH77 459 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SPECC1Q5M775 1068 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ANKRD23Q86SG2 305 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 VSTM4Q8IW00 320 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 FNBP1Q96RU3 617 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 TRIM9Q9C026 710 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 TRIM4Q9C037 500 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 INO80BQ9C086 356 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 RAVER2Q9HCJ3 691 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ZCCHC17Q9NP64 241 aaKnown RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 EMILIN3Q9NT22 766 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 ZNF112Q9UJU3 913 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 MANSC4A6NHS7 340 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 VCAM1P19320 739 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 PAFAH1B1P43034 410 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 TOB1P50616 345 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 DPCR1Q3MIW9 517 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 SH3D19Q5HYK7 790 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 HYIQ5T013 277 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 NAIF1Q69YI7 327 aaPredicted RBP6.55□□□□□ -1.36
SEC22A-201ENST00000309934 FRMD5Q7Z6J6 570 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 RSPH3Q86UC2 560 aa6.55□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC155Q8N6L0 562 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms