RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 LRMPQ12912 555 aa12.31□□□□□ -0.44
TRIM59-201ENST00000309784 NEDD9Q14511 834 aa12.31□□□□□ -0.44
TRIM59-201ENST00000309784 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
TRIM59-201ENST00000309784 LARSQ9P2J5 1176 aaKnown RBP12.31□□□□□ -0.44
TRIM59-201ENST00000309784 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
TRIM59-201ENST00000309784 UGCGQ16739 394 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ZNF746Q6NUN9 644 aaPredicted RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ANKRD23Q86SG2 305 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 NOC4LQ9BVI4 516 aaKnown RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 DHX15O43143 795 aaKnown RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 SLC26A4O43511 780 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 HIP1RO75146 1068 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 NMT1P30419 496 aaKnown RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ARSHQ5FYA8 562 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 GUF1Q8N442 669 aaKnown RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 CNOT6LQ96LI5 555 aaKnown RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ZNF302Q9NR11 478 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ASB14A6NK59 587 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ITGBL1O95965 494 aaPredicted RBP12.3□□□□□ -0.44
TRIM59-201ENST00000309784 GHRHRQ02643 423 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 GOLGA8FQ08AF8 430 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 GOLGA8DPQ0D2H9 430 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 KRT31Q15323 416 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
TRIM59-201ENST00000309784 MANSC4A6NHS7 340 aaPredicted RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 RGS20O76081 388 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 MOGSQ13724 837 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 HS2ST1Q7LGA3 356 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 FAM133AQ8N9E0 248 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 MED15Q96RN5 788 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 CLIC2O15247 247 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 MYBP10242 640 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 KCNA2P16389 499 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 UBA1P22314 1058 aaKnown RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 COPB1P53618 953 aaKnown RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 POLGP54098 1239 aaPredicted RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 GSDMDP57764 484 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 KSR1Q8IVT5 923 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 SPATA33Q96N06 139 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 MMRN2Q9H8L6 949 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 TEX33O43247 280 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 GAP43P17677 238 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 PEX3P56589 373 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 PRKCEQ02156 737 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 TTLL4Q14679 1199 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 TSR1Q2NL82 804 aaKnown RBP12.29□□□□□ -0.44
TRIM59-201ENST00000309784 SAPCD2Q86UD0 394 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 GPRC5CQ9NQ84 441 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 SLC5A4Q9NY91 659 aa12.29□□□□□ -0.44
TRIM59-201ENST00000309784 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 CETN3O15182 167 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 ADAM9Q13443 819 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 ZC2HC1CQ53FD0 456 aaPredicted RBP12.28□□□□□ -0.44
TRIM59-201ENST00000309784 ARMCX2Q7L311 632 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 CCDC60Q8IWA6 550 aaPredicted RBP12.28□□□□□ -0.44
TRIM59-201ENST00000309784 C17orf53Q8N3J3 647 aaPredicted RBP12.28□□□□□ -0.44
TRIM59-201ENST00000309784 PTPN18Q99952 460 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 FGFBP2Q9BYJ0 223 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 SUGCTQ9HAC7 445 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 NR2F2P24468 414 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 RARRES1P49788 294 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 FAM160B1Q5W0V3 765 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 GPR142Q7Z601 462 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 COPS5Q92905 334 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 BICD1Q96G01 975 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 TELO2Q9Y4R8 837 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 CYP2B6P20813 491 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 SMTNP53814 917 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 SP2Q02086 613 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 DCAF17Q5H9S7 520 aaPredicted RBP12.28□□□□□ -0.44
TRIM59-201ENST00000309784 RASAL3Q86YV0 1011 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 SEMA6BQ9H3T3 888 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 OTOFQ9HC10 1997 aa12.28□□□□□ -0.44
TRIM59-201ENST00000309784 SKILP12757 684 aa12.27□□□□□ -0.44
TRIM59-201ENST00000309784 CDC25BP30305 580 aa12.27□□□□□ -0.44
TRIM59-201ENST00000309784 TCF7P36402 384 aaPredicted RBP12.27□□□□□ -0.44
TRIM59-201ENST00000309784 MATR3P43243 847 aaKnown RBP eCLIP12.27□□□□□ -0.44
TRIM59-201ENST00000309784 FKBP3Q00688 224 aaKnown RBP12.27□□□□□ -0.44
TRIM59-201ENST00000309784 HS1BP3Q53T59 392 aa12.27□□□□□ -0.44
TRIM59-201ENST00000309784 GJC2Q5T442 439 aaPredicted RBP12.27□□□□□ -0.44
TRIM59-201ENST00000309784 SPECC1LQ69YQ0 1117 aa12.27□□□□□ -0.44
TRIM59-201ENST00000309784 HSD3B7Q9H2F3 369 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms