RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
RETREG3-201ENST00000309428 PLTPP55058 493 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.81□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC127Q96BQ5 260 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 TMEM150BA6NC51 233 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 LSP1P33241 339 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 MYO1EQ12965 1108 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 NLRP14Q86W24 1093 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 PDGFDQ9GZP0 370 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 UTP11Q9Y3A2 253 aaKnown RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 PLEKHG2Q9H7P9 1386 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 GOLGA8IPA6NC78 632 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 GOLGA8JA6NMD2 632 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 ZBTB5O15062 677 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 CETN3O15182 167 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 SESN3P58005 492 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 MAGOHP61326 146 aaKnown RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 MAGOHBQ96A72 148 aaKnown RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 FAM167BQ9BTA0 163 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 CHUKO15111 745 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 GFPT2O94808 682 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 MYBP10242 640 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 ALAS1P13196 640 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 PCK1P35558 622 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 COPB2P35606 906 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 CASP5P51878 434 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 WDR78Q5VTH9 848 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 RAD54LQ92698 747 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 DHTKD1Q96HY7 919 aaPredicted RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
RETREG3-201ENST00000309428 KBTBD4Q9NVX7 518 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 RAB21Q9UL25 225 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 USP20Q9Y2K6 914 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
RETREG3-201ENST00000309428 ECE2O60344 883 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 RHOBTB3O94955 611 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 ARHGAP4P98171 946 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC6Q16204 474 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 LRCH2Q5VUJ6 765 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC63Q8NA47 563 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 KCNV2Q8TDN2 545 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 PRMT6Q96LA8 375 aaPredicted RBP13.79□□□□□ -0.2
RETREG3-201ENST00000309428 RGS16O15492 202 aaPredicted RBP13.79□□□□□ -0.2
RETREG3-201ENST00000309428 MED24O75448 989 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 PPP1R37O75864 691 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CASP4P49662 377 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 TRAPPC11Q7Z392 1133 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 MYBL1P10243 752 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 SCP2P22307 547 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CDC25CP30307 473 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC38Q502W7 563 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 ASPRV1Q53RT3 343 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 SPATA20Q8TB22 786 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 ZNF473Q8WTR7 871 aaKnown RBP13.79□□□□□ -0.2
RETREG3-201ENST00000309428 CCSER1Q9C0I3 900 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
RETREG3-201ENST00000309428 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
RETREG3-201ENST00000309428 NDUFB10O96000 172 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 RCAN1P53805 252 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 TSEN2Q8NCE0 465 aaKnown RBP13.78□□□□□ -0.2
RETREG3-201ENST00000309428 MDM1Q8TC05 714 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 SHMT1P34896 483 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 SARNPP82979 210 aaKnown RBP13.78□□□□□ -0.2
RETREG3-201ENST00000309428 LRRC14Q15048 493 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 IFI16Q16666 785 aaKnown RBP13.78□□□□□ -0.2
RETREG3-201ENST00000309428 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 ZNF668Q96K58 619 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-201ENST00000309428 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-201ENST00000309428 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
RETREG3-201ENST00000309428 TOGARAM1Q9Y4F4 1720 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 MAN2A1Q16706 1144 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 COL4A3BPQ9Y5P4 624 aa13.78□□□□□ -0.2
RETREG3-201ENST00000309428 MYH8P13535 1937 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC169A6NNP5 214 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 GAS7O60861 476 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 FAM153BP0C7A2 387 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 ERFP50548 548 aa13.77□□□□□ -0.2
RETREG3-201ENST00000309428 FKBP3Q00688 224 aaKnown RBP13.77□□□□□ -0.2
RETREG3-201ENST00000309428 FAM153CQ494X1 144 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms