RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF333Q96JL9 665 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 FAM129BQ96TA1 746 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 ARHGAP39Q9C0H5 1083 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 ANKRD2Q9GZV1 360 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 VEZTQ9HBM0 779 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 PTCH2Q9Y6C5 1203 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 MUC3AQ02505 3323 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 FAM205AQ6ZU69 1335 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 FANCGO15287 622 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 HMMRO75330 724 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 REC8O95072 547 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 MCM2P49736 904 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 HK2P52789 917 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 ZNF445P59923 1031 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 FKBP1AP62942 108 aaKnown RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 FGD1P98174 961 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 NFKB2Q00653 900 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 SP3Q02447 781 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 ZNF252P-AS1Q0IIN9 211 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 NEXNQ0ZGT2 675 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 SFRP5Q5T4F7 317 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 PI16Q6UXB8 463 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 PRRT2Q7Z6L0 340 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 CXorf38Q8TB03 319 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 DNAAF4Q8WXU2 420 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 ANP32BQ92688 251 aaKnown RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 OPTNQ96CV9 577 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 SHISA4Q96DD7 197 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 IL17RAQ96F46 866 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 ERO1AQ96HE7 468 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 FAM84BQ96KN1 310 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 MPHOSPH8Q99549 860 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 EMILIN2Q9BXX0 1053 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 PUS3Q9BZE2 481 aaKnown RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 TMEM39BQ9GZU3 492 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 TDRD3Q9H7E2 651 aaKnown RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 CACNA2D2Q9NY47 1150 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 RTEL1Q9NZ71 1219 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 ZNF70Q9UC06 446 aaPredicted RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
CKS1B-201ENST00000308987 PPP2R3BQ9Y5P8 575 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 CAPN6Q9Y6Q1 641 aa5.82□□□□□ -1.48
CKS1B-201ENST00000308987 DOCK2Q92608 1830 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 ANKRD18BA2A2Z9 1011 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 UNCXA6NJT0 531 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 H0YGN5 161 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 TRIM13O60858 407 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 BAG4O95429 457 aaKnown RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 HPXP02790 462 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 TRHRP34981 398 aaPredicted RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 GYG1P46976 350 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 KCNJ4P48050 445 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 CACNB3P54284 484 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 ARHGAP4P98171 946 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 VGLL4Q14135 290 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 SUPT20HL1Q3ZLR7 823 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 BEND3Q5T5X7 828 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 ZBTB37Q5TC79 503 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 THAP5Q7Z6K1 395 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 LINS1Q8NG48 757 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.81□□□□□ -1.484e-8■■■■□ 19.8
CKS1B-201ENST00000308987 TDRD7Q8NHU6 1098 aaKnown RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 SH3TC2Q8TF17 1288 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 TRIM44Q96DX7 344 aaPredicted RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 PANK2Q9BZ23 570 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 GZF1Q9H116 711 aaPredicted RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 ZSWIM5Q9P217 1185 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 BIN2Q9UBW5 565 aaPredicted RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 SNCAIPQ9Y6H5 919 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 MYO5AQ9Y4I1 1855 aaKnown RBP5.81□□□□□ -1.48
CKS1B-201ENST00000308987 PLXNB2O15031 1838 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 ATAD5Q96QE3 1844 aa5.81□□□□□ -1.48
CKS1B-201ENST00000308987 CDK5RAP2Q96SN8 1893 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 CCL15-CCL14A0A0B4J2E2 113 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TCP10L2B9ZVM9 353 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 BTBD19C9JJ37 291 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 RBAK-RBAKDNI3L0D1 243 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 RRP9O43818 475 aaKnown RBP5.8□□□□□ -1.48
CKS1B-201ENST00000308987 LRIG2O94898 1065 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TPM2P07951 284 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 GSPT1P15170 499 aaKnown RBP5.8□□□□□ -1.48
CKS1B-201ENST00000308987 NME2P22392 152 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 MCM5P33992 734 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 ANAPC15P60006 121 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 MOGSQ13724 837 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TAF1CQ15572 869 aaPredicted RBP5.8□□□□□ -1.48
CKS1B-201ENST00000308987 CCL15Q16663 113 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 GLIPR1L2Q4G1C9 344 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 MFSD14BQ5SR56 506 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TCERG1LQ5VWI1 586 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 CEP85Q6P2H3 762 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 ZNF804AQ7Z570 1209 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 FBXO33Q7Z6M2 555 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 UBE2Q1Q7Z7E8 422 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 ELMO3Q96BJ8 720 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 CITED4Q96RK1 184 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 STK31Q9BXU1 1019 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms