RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 POTEB3A0JP26 581 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 RFXAPO00287 272 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 TLL1O43897 1013 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 LPXNO60711 386 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 POU3F3P20264 500 aaPredicted RBP22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 CYP3A7P24462 503 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 HTRA4P83105 476 aaPredicted RBP22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 FBXO47Q5MNV8 452 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 POTEBQ6S5H4 581 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 B3GNT9Q6UX72 402 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 SLC5A5Q92911 643 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 GAS2L1Q99501 681 aaPredicted RBP22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 SLKQ9H2G2 1235 aaPredicted RBP22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 CERS4Q9HA82 394 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 KCNJ14Q9UNX9 436 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 TRPC6Q9Y210 931 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 PCDHA2Q9Y5H9 948 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 XIRP2A4UGR9 3374 aa22.49■■□□□ 1.19
PDZRN3-202ENST00000308537 MUC3AQ02505 3323 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 TDP2O95551 362 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 GHRP10912 638 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 SWSAP1Q6NVH7 229 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 CPLX2Q6PUV4 134 aaKnown RBP22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 SP7Q8TDD2 431 aaPredicted RBP22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 SEPT8Q92599 483 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 GJA10Q969M2 543 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 RAD9AQ99638 391 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 IFIH1Q9BYX4 1025 aaKnown RBP22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 AGO3Q9H9G7 860 aaKnown RBP22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 ZNF302Q9NR11 478 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 CDY2AQ9Y6F7 541 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 IGSF9BQ9UPX0 1349 aa22.48■■□□□ 1.19
PDZRN3-202ENST00000308537 KIF28PB7ZC32 967 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 MRPS6P82932 125 aaKnown RBP22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 KRT76Q01546 638 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 C8orf34Q49A92 452 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 Q4G0T1 1027 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 GALNT17Q6IS24 598 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 MIS18BP1Q6P0N0 1132 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 MTHFD1LQ6UB35 978 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 SMAP1Q8IYB5 467 aaPredicted RBP22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 TOP1MTQ969P6 601 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 PRDM6Q9NQX0 595 aa22.47■■□□□ 1.19
PDZRN3-202ENST00000308537 SMIM35A0A1B0GVV1 85 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 LINC01553A4QN01 128 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 ZNF862O60290 1169 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 HBP1O60381 514 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 PSMD10O75832 226 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 PDXDC2PQ6P474 469 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 MOXD1Q6UVY6 613 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 NECAB1Q8N987 351 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 OXER1Q8TDS5 423 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 LINC01599Q8WXQ3 324 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 APBB2Q92870 758 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 GTF3C6Q969F1 213 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 FAM49AQ9H0Q0 323 aaPredicted RBP22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 PCDHA10Q9Y5I2 948 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 COL1A2P08123 1366 aa22.46■■□□□ 1.19
PDZRN3-202ENST00000308537 NCOR1O75376 2440 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 BACH1O14867 736 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 CDKL5O76039 1030 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 ANKRD1Q15327 319 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 EARS2Q5JPH6 523 aaKnown RBP22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 FAM160B1Q5W0V3 765 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 FAM117BQ6P1L5 589 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 MYOCDQ8IZQ8 938 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 NSUN7Q8NE18 718 aaKnown RBP22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 ETNPPLQ8TBG4 499 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 RIT2Q99578 217 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 KIF2CQ99661 725 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 C22orf23Q9BZE7 217 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 KDM3AQ9Y4C1 1321 aa22.45■■□□□ 1.18
PDZRN3-202ENST00000308537 C22orf31O95567 290 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 AMHP03971 560 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 KLRC1P26715 233 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 TMEM62Q0P6H9 643 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 UGCGQ16739 394 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 KRT40Q6A162 431 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 RSPH3Q86UC2 560 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 NLRC5Q86WI3 1866 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 KIAA0319LQ8IZA0 1049 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 CRIPAKQ8N1N5 446 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 ARNTL2Q8WYA1 636 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 TNFRSF25Q93038 417 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 UNC45AQ9H3U1 944 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 RC3H2Q9HBD1 1191 aaKnown RBP22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 MTCH2Q9Y6C9 303 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 SQORQ9Y6N5 450 aa22.44■■□□□ 1.18
PDZRN3-202ENST00000308537 SLC37A4O43826 429 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 RPLP2P05387 115 aaKnown RBP22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 NEK4P51957 841 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 ERVK-21P61565 698 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 INF2Q27J81 1249 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 TSHZ1Q6ZSZ6 1077 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 RTN4RL1Q86UN2 441 aaPredicted RBP22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 LINC01465Q8N7H1 131 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 BBXQ8WY36 941 aaPredicted RBP22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 TNPO1Q92973 898 aaKnown RBP22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 ZBED2Q9BTP6 218 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 DISC1Q9NRI5 854 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms