RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 SPON1Q9HCB6 807 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 AGPAT5Q9NUQ2 364 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 DNM1LO00429 736 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 OPHN1O60890 802 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 SLC44A4Q53GD3 710 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 CFAP157Q5JU67 520 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 IRF2BP1Q8IU81 584 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 LARGE2Q8N3Y3 721 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 ATP6V1G3Q96LB4 118 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 RMDN2Q96LZ7 410 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 HAUS4Q9H6D7 363 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 PLAAQ9Y263 795 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 HMGB1P1B2RPK0 211 aaPredicted RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 HEXIM1O94992 359 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 CCND1P24385 295 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 ZNF280DQ6N043 979 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 CEP70Q8NHQ1 597 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 CRNKL1Q9BZJ0 848 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 LSM1O15116 133 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 HIBADHP31937 336 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 SFSWAPQ12872 951 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 YTHDF3Q7Z739 585 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 NSUN4Q96CB9 384 aaKnown RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 TRIM31Q9BZY9 425 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 TAF1P21675 1872 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 MARCH6O60337 910 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 NPR1P16066 1061 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 KCTD19Q17RG1 926 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 USP6NLQ92738 828 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 CCDC42Q96M95 316 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 NDUFA10O95299 355 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 CDCA2Q69YH5 1023 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 CDK5RAP3Q96JB5 506 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 SHANK3Q9BYB0 1731 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 CCDC194A0A1B0GVG4 234 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 RCN2Q14257 317 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 TDRD12Q587J7 1177 aaKnown RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 TTMPQ5BVD1 217 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 ZNF658Q5TYW1 1059 aaPredicted RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 BLIDQ8IZY5 108 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 PIDD1Q9HB75 910 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 DMGDHQ9UI17 866 aaKnown RBP11.35□□□□□ -0.59
MSRB3-201ENST00000308259 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
MSRB3-201ENST00000308259 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 WDR78Q5VTH9 848 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 ERICH1Q86X53 443 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 RPS6KC1Q96S38 1066 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 ECT2Q9H8V3 914 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 UTP6Q9NYH9 597 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 LIMA1Q9UHB6 759 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TMA7Q9Y2S6 64 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 MYH8P13535 1937 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 NID2Q14112 1375 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 NUP98P52948 1817 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 IGF2BP3O00425 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 CAPN15O75808 1086 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 FCER1AP12319 257 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 UBA7P41226 1012 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 ZBED6P86452 979 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 IKQ13123 557 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 IFI16Q16666 785 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 NAALADL2Q58DX5 795 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 RNF220Q5VTB9 566 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 PTF1AQ7RTS3 328 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 RBM12BQ8IXT5 1001 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SPICE1Q8N0Z3 855 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 OR2W6PQ8NHA6 318 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 UHMK1Q8TAS1 419 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SMARCAL1Q9NZC9 954 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SPDYE5A6NIY4 337 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 CCT8L1PA6NM43 557 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 PLEKP08567 350 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 SEPT2Q15019 361 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 GRIK5Q16478 980 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
MSRB3-201ENST00000308259 GALNT15Q8N3T1 639 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 TEX9Q8N6V9 391 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 LACRTQ9GZZ8 138 aa11.34□□□□□ -0.59
MSRB3-201ENST00000308259 PREBQ9HCU5 417 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms