RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SENP7Q9BQF6 1050 aa7.76□□□□□ -1.17
PTCD2-201ENST00000308077 RUSC1Q9BVN2 902 aa7.76□□□□□ -1.17
PTCD2-201ENST00000308077 LRRC27Q9C0I9 530 aa7.76□□□□□ -1.17
PTCD2-201ENST00000308077 CTNND2Q9UQB3 1225 aa7.76□□□□□ -1.17
PTCD2-201ENST00000308077 MAPK8IP1Q9UQF2 711 aa7.76□□□□□ -1.17
PTCD2-201ENST00000308077 SYNRGQ9UMZ2 1314 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 FRMD3A2A2Y4 597 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 WDR64B1ANS9 1081 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 IDEP14735 1019 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 UBA1P22314 1058 aaKnown RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 SFNP31947 248 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 JAK3P52333 1124 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 COASYQ13057 564 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 GIT2Q14161 759 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 TAF1CQ15572 869 aaPredicted RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 CT47A1Q5JQC4 288 aaPredicted RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 ZNF746Q6NUN9 644 aaPredicted RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 KCTD17Q8N5Z5 321 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 ENOX1Q8TC92 643 aaKnown RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 FGFBP2Q9BYJ0 223 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 JPH1Q9HDC5 661 aaPredicted RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 ZCCHC17Q9NP64 241 aaKnown RBP7.75□□□□□ -1.17
PTCD2-201ENST00000308077 FANCLQ9NW38 375 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 SLC9A2Q9UBY0 812 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 SAMM50Q9Y512 469 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 MUC6Q6W4X9 2439 aa7.75□□□□□ -1.17
PTCD2-201ENST00000308077 LYPLA2O95372 231 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ARIH2O95376 493 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ATP1A3P13637 1013 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 QARSP47897 775 aaKnown RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PMS1P54277 932 aaKnown RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 SP4Q02446 784 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 GRB14Q14449 540 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 RINT1Q6NUQ1 792 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 SARM1Q6SZW1 724 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PAXIP1Q6ZW49 1069 aaPredicted RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 C1orf186Q6ZWK4 172 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 FBXO16Q8IX29 292 aaPredicted RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ABRAQ8N0Z2 381 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 GLIS3Q8NEA6 775 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 RDM1Q8NG50 284 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 NELFBQ8WX92 580 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ANP32BQ92688 251 aaKnown RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 NACC1Q96RE7 527 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 REEP2Q9BRK0 252 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ZSWIM4Q9H7M6 989 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 SLC39A2Q9NP94 309 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PANK4Q9NVE7 773 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 NFE2L3Q9Y4A8 694 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PCDHA2Q9Y5H9 948 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 DOCK3Q8IZD9 2030 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ZSWIM8A7E2V4 1837 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 MYH11P35749 1972 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 TMEM150BA6NC51 233 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 TRIM49BA6NDI0 452 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 RSPH10B2B2RC85 870 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 B4DLN1 442 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 STRNO43815 780 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 RSPH10BP0C881 870 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ZNF18P17022 549 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 MAPK4P31152 587 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ZNF75DP51815 510 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ACTR2P61160 394 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PAK1Q13153 545 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 LY6KQ17RY6 165 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 COBLL1Q53SF7 1204 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 HSP90AA4PQ58FG1 418 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 C17orf99Q6UX52 265 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ABHD15Q6UXT9 468 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 ARMCX2Q7L311 632 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PLEKHH3Q7Z736 793 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 CCDC60Q8IWA6 550 aaPredicted RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 SMAP1Q8IYB5 467 aaPredicted RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 CCDC102AQ96A19 550 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 CCDC47Q96A33 483 aaKnown RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 LRFN3Q9BTN0 628 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 POLD4Q9HCU8 107 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 SAMSN1Q9NSI8 373 aaKnown RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 RWDD2AQ9UIY3 292 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 PCDHA10Q9Y5I2 948 aa7.74□□□□□ -1.17
PTCD2-201ENST00000308077 MYH9P35579 1960 aaKnown RBP7.74□□□□□ -1.17
PTCD2-201ENST00000308077 MGAMO43451 1857 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 LOC102724159A0A0B4J2E5 919 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 ASB14A6NK59 587 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 ZNF862O60290 1169 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TLR2O60603 784 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 ECM2O94769 699 aaPredicted RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 STBD1O95210 358 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 ATG7O95352 703 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TM4SF4P48230 202 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 INHBEP58166 350 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PSMC5P62195 406 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 GRM1Q13255 1194 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 PWP2Q15269 919 aaKnown RBP7.73□□□□□ -1.17
PTCD2-201ENST00000308077 TMEM63BQ5T3F8 832 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 SPATA1Q5VX52 437 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 C4orf19Q8IY42 314 aa7.73□□□□□ -1.17
PTCD2-201ENST00000308077 NPLOC4Q8TAT6 608 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms