RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
SEC23A-201ENST00000307712 NPHP3-ACAD11A0A0J9YXS1 232 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 CHN1P15882 459 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 SLC9A1P19634 815 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 ADCY2Q08462 1091 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 MUM1Q2TAK8 710 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 SFR1Q86XK3 245 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 ZNF507Q8TCN5 953 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 RAB3IPQ96QF0 476 aaPredicted RBP14.59□□□□□ -0.07
SEC23A-201ENST00000307712 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 SPATS2LQ9NUQ6 558 aaKnown RBP14.59□□□□□ -0.07
SEC23A-201ENST00000307712 AGLP35573 1532 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 C3P01024 1663 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 CDK17Q00537 523 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 FYB2Q5VWT5 728 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 LRIG3Q6UXM1 1119 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 FAM47EQ6ZV65 393 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
SEC23A-201ENST00000307712 PPP1R14CQ8TAE6 165 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 GPR101Q96P66 508 aaPredicted RBP14.59□□□□□ -0.07
SEC23A-201ENST00000307712 BHMT2Q9H2M3 363 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 SLITRK6Q9H5Y7 841 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 VCPKMTQ9H867 229 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 RABGAP1Q9Y3P9 1069 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 MEGF6O75095 1541 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 PSMC2P35998 433 aaKnown RBP14.59□□□□□ -0.07
SEC23A-201ENST00000307712 PTK2Q05397 1052 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 KCTD19Q17RG1 926 aaPredicted RBP14.59□□□□□ -0.07
SEC23A-201ENST00000307712 TMOD2Q9NZR1 351 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 ANAPC4Q9UJX5 808 aa14.59□□□□□ -0.07
SEC23A-201ENST00000307712 POC1B-GALNT4F8VUJ3 575 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 STXBP3O00186 592 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 KIF1CO43896 1103 aaKnown RBP14.58□□□□□ -0.07
SEC23A-201ENST00000307712 PDHBP11177 359 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 COPB2P35606 906 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 SLFN12Q8IYM2 578 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 RAPGEF5Q92565 580 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 SPDL1Q96EA4 605 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 SLAIN2Q9P270 581 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 SPATA31A3Q5VYP0 1347 aa14.58□□□□□ -0.07
SEC23A-201ENST00000307712 IFNB1P01574 187 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 GTF2IP78347 998 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP37Q86T82 979 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 KIFAP3Q92845 792 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 CCDC127Q96BQ5 260 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 CEP95Q96GE4 821 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 DNAJC12Q9UKB3 198 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 POTEFA5A3E0 1075 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L15C9J2P7 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L11C9JVI0 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L18D6R9N7 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L22D6RA61 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L19D6RCP7 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L20D6RJB6 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 FGFR2P21802 821 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 SKOR1P84550 965 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 MYL7Q01449 175 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L24Q0WX57 530 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 SLMAPQ14BN4 828 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 ASPRV1Q53RT3 343 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 ODR4Q5SWX8 454 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 USP17L6PQ6QN14 398 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 POTEGQ6S5H5 508 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 POTEEQ6S8J3 1075 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 METTL13Q8N6R0 699 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 MTRQ99707 1265 aa14.58□□□□□ -0.08
SEC23A-201ENST00000307712 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 EPHB6O15197 1021 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 GCFC2P16383 781 aaKnown RBP14.57□□□□□ -0.08
SEC23A-201ENST00000307712 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
SEC23A-201ENST00000307712 TBC1D10BQ4KMP7 808 aaPredicted RBP14.57□□□□□ -0.08
SEC23A-201ENST00000307712 P3H4Q92791 437 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 TMBIM4Q9HC24 238 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 AGPSO00116 658 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 ECEL1O95672 775 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 ATF2P15336 505 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 BYSLQ13895 437 aaKnown RBP14.57□□□□□ -0.08
SEC23A-201ENST00000307712 SGO2Q562F6 1265 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 C12orf60Q5U649 245 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 AP1ARQ63HQ0 302 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 CENPPQ6IPU0 288 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 ZNF449Q6P9G9 518 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 CNBD1Q8NA66 436 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 PRMT1Q99873 361 aaKnown RBP14.57□□□□□ -0.08
SEC23A-201ENST00000307712 CACNA1FO60840 1977 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 H0Y3Z8 333 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 UCHL3P15374 230 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 FGFR4P22455 802 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 STAT3P40763 770 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 RASSF2P50749 326 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 USP11P51784 963 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 IL17AQ16552 155 aa14.57□□□□□ -0.08
SEC23A-201ENST00000307712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.57□□□□□ -0.08
SEC23A-201ENST00000307712 YIPF3Q9GZM5 350 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms