RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
CLCC1-201ENST00000302500 PPFIA1Q13136 1202 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 NR5A1Q13285 461 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 ADGRE1Q14246 886 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 PPP4R3AQ6IN85 833 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 RETREG2Q8NC44 543 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 DBF4BQ8NFT6 615 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 ATP8B4Q8TF62 1192 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 UIMC1Q96RL1 719 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 ZNF577Q9BSK1 485 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 ZNF576Q9H609 170 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
CLCC1-201ENST00000302500 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
CLCC1-201ENST00000302500 TUBE1Q9UJT0 475 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 PCDHA11Q9Y5I1 949 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 KDM3AQ9Y4C1 1321 aa12.78□□□□□ -0.36
CLCC1-201ENST00000302500 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 EPOPA6NHQ4 379 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 CDKL5O76039 1030 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 ATP2A2P16615 1042 aaKnown RBP12.77□□□□□ -0.37
CLCC1-201ENST00000302500 THPOP40225 353 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 LPIN1Q14693 890 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.37
CLCC1-201ENST00000302500 INF2Q27J81 1249 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 TMCO2Q7Z6W1 182 aaPredicted RBP12.77□□□□□ -0.37
CLCC1-201ENST00000302500 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 SMAP1Q8IYB5 467 aaPredicted RBP12.77□□□□□ -0.37
CLCC1-201ENST00000302500 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
CLCC1-201ENST00000302500 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 FAM161BQ96MY7 647 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 UNC45AQ9H3U1 944 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 PCDHA2Q9Y5H9 948 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 COL1A2P08123 1366 aa12.77□□□□□ -0.37
CLCC1-201ENST00000302500 SMIM35A0A1B0GVV1 85 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 LCHNA4D1U4 455 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 RRN3P2A6NIE6 340 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 DDX39AO00148 427 aaKnown RBP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 GJB5O95377 273 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 C22orf31O95567 290 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 MMP1P03956 469 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 HTRA4P83105 476 aaPredicted RBP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 KRT76Q01546 638 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 FBXO47Q5MNV8 452 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 CPLX2Q6PUV4 134 aaKnown RBP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 KRT25Q7Z3Z0 450 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 DNAJB3Q8WWF6 145 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 GLG1Q92896 1179 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 NKX2-4Q9H2Z4 354 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 AGO3Q9H9G7 860 aaKnown RBP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 WRAP73Q9P2S5 460 aaPredicted RBP12.76□□□□□ -0.37
CLCC1-201ENST00000302500 LIMCH1Q9UPQ0 1083 aa12.76□□□□□ -0.37
CLCC1-201ENST00000302500 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
CLCC1-201ENST00000302500 EML1O00423 815 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 LPXNO60711 386 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 CTSHP09668 335 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 GNAT1P11488 350 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 POU3F3P20264 500 aaPredicted RBP12.75□□□□□ -0.37
CLCC1-201ENST00000302500 ZNF76P36508 570 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 TAP1Q03518 808 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 PPP2R5CQ13362 524 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 NONOQ15233 471 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLCC1-201ENST00000302500 RAB30Q15771 203 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 RTN4RL1Q86UN2 441 aaPredicted RBP12.75□□□□□ -0.37
CLCC1-201ENST00000302500 TMEM40Q8WWA1 233 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 MYLIPQ8WY64 445 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 ZNF302Q9NR11 478 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 PCDHA10Q9Y5I2 948 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 SQORQ9Y6N5 450 aa12.75□□□□□ -0.37
CLCC1-201ENST00000302500 IGKV6-21A0A0C4DH24 114 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 BTBD18B2RXH4 712 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 HBP1O60381 514 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 CA3P07451 260 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 KRT40Q6A162 431 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 MIS18BP1Q6P0N0 1132 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 USP38Q8NB14 1042 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 RDM1Q8NG50 284 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
CLCC1-201ENST00000302500 LLPHQ9BRT6 129 aaKnown RBP12.74□□□□□ -0.37
CLCC1-201ENST00000302500 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
CLCC1-201ENST00000302500 CDHR5Q9HBB8 845 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 DISC1Q9NRI5 854 aa12.74□□□□□ -0.37
CLCC1-201ENST00000302500 WDR64B1ANS9 1081 aa12.73□□□□□ -0.37
CLCC1-201ENST00000302500 GPR32O75388 356 aa12.73□□□□□ -0.37
CLCC1-201ENST00000302500 ACTN1P12814 892 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms