RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
SMG8-201ENST00000300917 TRAF1Q13077 416 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 RMDN3Q96TC7 470 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 POLR3CQ9BUI4 534 aaPredicted RBP16.05■□□□□ 0.16
SMG8-201ENST00000300917 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 ARHGEF35A5YM69 484 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
SMG8-201ENST00000300917 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
SMG8-201ENST00000300917 BAATQ14032 418 aaPredicted RBP16.05■□□□□ 0.16
SMG8-201ENST00000300917 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
SMG8-201ENST00000300917 TCEAL9Q9UHQ7 104 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
SMG8-201ENST00000300917 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
SMG8-201ENST00000300917 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
SMG8-201ENST00000300917 KIF11P52732 1056 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 MEA1Q16626 185 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 GJB7Q6PEY0 223 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 IFIH1Q9BYX4 1025 aaKnown RBP16.04■□□□□ 0.16
SMG8-201ENST00000300917 KIAA1683Q9H0B3 1180 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 NR3C1P04150 777 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 MTMR1Q13613 665 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 PTPROQ16827 1216 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 TRIM59Q8IWR1 403 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 FAM178BQ8IXR5 827 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 RETREG2Q8NC44 543 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
SMG8-201ENST00000300917 SLC38A10Q9HBR0 1119 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 TELO2Q9Y4R8 837 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 FRMD3A2A2Y4 597 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 BUB1O43683 1085 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 KIF20AO95235 890 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 CHMP4BP1P59074 171 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 KRT83P78385 493 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 TKFCQ3LXA3 575 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 RNF207Q6ZRF8 634 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 VPS33BQ9H267 617 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 PCIF1Q9H4Z3 704 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 GPRC5CQ9NQ84 441 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 PPP1R9AQ9ULJ8 1098 aa16.04■□□□□ 0.16
SMG8-201ENST00000300917 PPP2R5CQ13362 524 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
SMG8-201ENST00000300917 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 BAP1Q92560 729 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 CDC23Q9UJX2 597 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 SYNPO2Q9UMS6 1093 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 PLAGL2Q9UPG8 496 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 ASTN1O14525 1302 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 ZNF185O15231 689 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 ZBED4O75132 1171 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 NOL4O94818 638 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 MOCS3O95396 460 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 PLA2G4FQ68DD2 849 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 SYCP3Q8IZU3 236 aa16.03■□□□□ 0.16
SMG8-201ENST00000300917 EFCAB8A8MWE9 144 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 HIP1RO75146 1068 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 HSD17B4P51659 736 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 NPEPPSP55786 919 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 KIF5AQ12840 1032 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 NACC1Q96RE7 527 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 JADE2Q9NQC1 790 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 KRT86O43790 486 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 TRIM49P0CI25 452 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 TRIM49CP0CI26 452 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.16
SMG8-201ENST00000300917 SOX10P56693 466 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 MRPS25P82663 173 aaKnown RBP16.02■□□□□ 0.16
SMG8-201ENST00000300917 MAP3K10Q02779 954 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 UGCGQ16739 394 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 PDXDC1Q6P996 788 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 LPAR1Q92633 364 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 CEP63Q96MT8 703 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 HAUS4Q9H6D7 363 aa16.02■□□□□ 0.16
SMG8-201ENST00000300917 VWA5AO00534 786 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.15
SMG8-201ENST00000300917 PTPRAP18433 802 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 CXCR5P32302 372 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 BACE1P56817 501 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 PADI6Q6TGC4 694 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 TUFT1Q9NNX1 390 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 ST7Q9NRC1 585 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 PCDHA13Q9Y5I0 950 aa16.02■□□□□ 0.15
SMG8-201ENST00000300917 TGFB1I1O43294 461 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 TLR2O60603 784 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 RPS12P25398 132 aaKnown RBP16.01■□□□□ 0.15
SMG8-201ENST00000300917 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
SMG8-201ENST00000300917 EPHA7Q15375 998 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 MYO6Q9UM54 1294 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 CAPN6Q9Y6Q1 641 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 FZD9O00144 591 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 CALUO43852 315 aaPredicted RBP16.01■□□□□ 0.15
SMG8-201ENST00000300917 DDNO94850 711 aaPredicted RBP16.01■□□□□ 0.15
SMG8-201ENST00000300917 MAGEA1P43355 309 aa16.01■□□□□ 0.15
SMG8-201ENST00000300917 SCYL3Q8IZE3 742 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms