RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 DR1Q01658 176 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 TRADDQ15628 312 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 DCUN1D2Q6PH85 259 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 PTF1AQ7RTS3 328 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 KIAA0895Q8NCT3 520 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 ZNF577Q9BSK1 485 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 MTMR3Q13615 1198 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 DRAP1Q14919 205 aaPredicted RBP14.44□□□□□ -0.1
CASC4-201ENST00000299957 C2CD6Q53TS8 623 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 NEDD1Q8NHV4 660 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 ZNF668Q96K58 619 aaPredicted RBP14.44□□□□□ -0.1
CASC4-201ENST00000299957 AGTPBP1Q9UPW5 1226 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 ZBTB5O15062 677 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 PSMC2P35998 433 aaKnown RBP14.44□□□□□ -0.1
CASC4-201ENST00000299957 DYNLT1P63172 113 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 ZNF394Q53GI3 561 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 ALS2CLQ60I27 953 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 PPP4R3AQ6IN85 833 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 PASD1Q8IV76 773 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
CASC4-201ENST00000299957 ARHGEF2Q92974 986 aaKnown RBP14.44□□□□□ -0.1
CASC4-201ENST00000299957 LARSQ9P2J5 1176 aaKnown RBP14.44□□□□□ -0.1
CASC4-201ENST00000299957 PPIP5K2O43314 1243 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 TOM1O60784 492 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 CASP4P49662 377 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 GRB10Q13322 594 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 EPC2Q52LR7 807 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 LMBRD2Q68DH5 695 aaPredicted RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 MSANTD4Q8NCY6 345 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 IMPG2Q9BZV3 1241 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 ARHGEF10LQ9HCE6 1279 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 PLAGL2Q9UPG8 496 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 PEAK1Q9H792 1746 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 EIF2AK2P19525 551 aaKnown RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 FGFR4P22455 802 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 SMAD1Q15797 465 aaKnown RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 WDR59Q6PJI9 974 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 CLEC4GQ6UXB4 293 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 SH3GLB2Q9NR46 395 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 TTC7AQ9ULT0 858 aaPredicted RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 PDHBP11177 359 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 RCAN1P53805 252 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 WDR44Q5JSH3 913 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 POMGNT1Q8WZA1 660 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 DYDC2Q96IM9 177 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 ANKFY1Q9P2R3 1169 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 SWAP70Q9UH65 585 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 NARFQ9UHQ1 456 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 REXO2Q9Y3B8 237 aaKnown RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 FLT1P17948 1338 aa14.43□□□□□ -0.1
CASC4-201ENST00000299957 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.43□□□□□ -0.1
CASC4-201ENST00000299957 PVALEFA0A1B0GWK0 134 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 KRT19P08727 400 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 POLR2MP0CAP2 368 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 PCK1P35558 622 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 SMTNP53814 917 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 SETDB1Q15047 1291 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 NUGGCQ68CJ6 796 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 KIRREL3Q8IZU9 778 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 TSEN2Q8NCE0 465 aaKnown RBP14.42□□□□□ -0.1
CASC4-201ENST00000299957 CCT8L2Q96SF2 557 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 ZNF148Q9UQR1 794 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 BSPRYQ5W0U4 402 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 PPP1R21Q6ZMI0 780 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 NLRP14Q86W24 1093 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 LARGE2Q8N3Y3 721 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 SUPT20HQ8NEM7 779 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 PARVGQ9HBI0 331 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 KBTBD4Q9NVX7 518 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 MTMR4Q9NYA4 1195 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 F5H6K3 240 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 BMP3P12645 472 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 UCHL3P15374 230 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 PEX3P56589 373 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 KLRC3Q07444 240 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 PPP2R5DQ14738 602 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 NAALADL2Q58DX5 795 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 NT5DC1Q5TFE4 455 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 SAAL1Q96ER3 474 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 DNAJC7Q99615 494 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 STMN4Q9H169 189 aaPredicted RBP14.42□□□□□ -0.1
CASC4-201ENST00000299957 GJA3Q9Y6H8 435 aa14.42□□□□□ -0.1
CASC4-201ENST00000299957 HNRNPDLO14979 420 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 MMEP08473 750 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 FERP16591 822 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 KNOP1Q1ED39 458 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 MMS22LQ6ZRQ5 1243 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 FBXL16Q8N461 479 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 CCDC197Q8NCU1 140 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 SLC30A5Q8TAD4 765 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 HNRNPLLQ8WVV9 542 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 C1orf54Q8WWF1 131 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 REEP2Q9BRK0 252 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 ZMYND12Q9H0C1 365 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 DHX36Q9H2U1 1008 aaKnown RBP14.41□□□□□ -0.1
CASC4-201ENST00000299957 PNMA2Q9UL42 364 aa14.41□□□□□ -0.1
CASC4-201ENST00000299957 LOC102724159A0A0B4J2E5 919 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms