RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 SUFUQ9UMX1 484 aa9.98□□□□□ -0.81
MMP3-201ENST00000299855 AXIN2Q9Y2T1 843 aa9.98□□□□□ -0.81
MMP3-201ENST00000299855 TNS1Q9HBL0 1735 aaKnown RBP9.98□□□□□ -0.81
MMP3-201ENST00000299855 RGPD5Q99666 1765 aa9.98□□□□□ -0.81
MMP3-201ENST00000299855 SPEF2Q9C093 1822 aa9.98□□□□□ -0.81
MMP3-201ENST00000299855 KLHL41O60662 606 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 KPNA6O60684 536 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 N4BP1O75113 896 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 PRPF6O94906 941 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 MAPK9P45984 424 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 LIMK1P53667 647 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 DSC3Q14574 896 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 RASA2Q15283 850 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 SPDYCQ5MJ68 293 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 NUGGCQ68CJ6 796 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 TRIM68Q6AZZ1 485 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 FOXR1Q6PIV2 292 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 TOM1L2Q6ZVM7 507 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 FOXP4Q8IVH2 680 aaPredicted RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 FAM26EQ8N5C1 309 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 DDX12PQ92771 950 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 EMID1Q96A84 441 aaPredicted RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 EDC3Q96F86 508 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 CLMNQ96JQ2 1002 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 NAPGQ99747 312 aaPredicted RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 CAAP1Q9H8G2 361 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 GPR108Q9NPR9 543 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 DISC1Q9NRI5 854 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 ZNF180Q9UJW8 692 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 PARP4Q9UKK3 1724 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 TARSL2A2RTX5 802 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 SYF2O95926 243 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 ATP6V1B1P15313 513 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 FERP16591 822 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 RFX5P48382 616 aaPredicted RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 VSNL1P62760 191 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 ATP2B2Q01814 1243 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 EHHADHQ08426 723 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 PNOCQ13519 176 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 KARSQ15046 597 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 ZNF569Q5MCW4 686 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 SPATA1Q5VX52 437 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 BTNL9Q6UXG8 535 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 TBC1D1Q86TI0 1168 aaPredicted RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 PPFIBP1Q86W92 1011 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 TMTC1Q8IUR5 882 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 PURBQ96QR8 312 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 KATNAL1Q9BW62 490 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 STARD7Q9NQZ5 370 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 ETAA1Q9NY74 926 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
MMP3-201ENST00000299855 NFE2L3Q9Y4A8 694 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 CD2APQ9Y5K6 639 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 WDR17Q8IZU2 1322 aa9.97□□□□□ -0.81
MMP3-201ENST00000299855 SYNJ2BP-COX16A0A087WUM0 186 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 GOLGA6L10A0A0M3HER8 536 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 TBKBP1A7MCY6 615 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 RNF40O75150 1001 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 CYP17A1P05093 508 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 SKIP12755 728 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 PLCB3Q01970 1234 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 PDE4BQ07343 736 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 GOLGA8FQ08AF8 430 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 GOLGA8DPQ0D2H9 430 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 DPYDQ12882 1025 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 IFRD2Q12894 506 aaPredicted RBP9.96□□□□□ -0.81
MMP3-201ENST00000299855 CNGA3Q16281 694 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 OCLNQ16625 522 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 CCDC152Q4G0S7 254 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 INTS11Q5TA45 600 aaKnown RBP9.96□□□□□ -0.81
MMP3-201ENST00000299855 CNGA4Q8IV77 575 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 TEX11Q8IYF3 940 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 RASGRP4Q8TDF6 673 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 FBF1Q8TES7 1133 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 SEC16BQ96JE7 1060 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 A1CFQ9NQ94 594 aaKnown RBP9.96□□□□□ -0.81
MMP3-201ENST00000299855 NKIRAS2Q9NYR9 191 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 AIPL1Q9NZN9 384 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 GIMAP2Q9UG22 337 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 GGT7Q9UJ14 662 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 KCNH3Q9ULD8 1083 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 EPN1Q9Y6I3 576 aaPredicted RBP9.96□□□□□ -0.81
MMP3-201ENST00000299855 MROH7-TTC4A0A0A0MT08 1334 aa9.96□□□□□ -0.81
MMP3-201ENST00000299855 KDM6AO15550 1401 aaPredicted RBP9.96□□□□□ -0.81
MMP3-201ENST00000299855 LRRIQ3A6PVS8 624 aaPredicted RBP9.95□□□□□ -0.82
MMP3-201ENST00000299855 KIF28PB7ZC32 967 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 PLOD2O00469 737 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 EBAG9O00559 213 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 KCNQ3O43525 872 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 ERLIN2O94905 339 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 FGFR1OPO95684 399 aaKnown RBP9.95□□□□□ -0.82
MMP3-201ENST00000299855 APBA3O96018 575 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 ANXA1P04083 346 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 CTSHP09668 335 aa9.95□□□□□ -0.82
MMP3-201ENST00000299855 GZMAP12544 262 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms