RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 CCDC144BQ3MJ40 725 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 GBA2Q9HCG7 927 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-201ENST00000299267 CPA4Q9UI42 421 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 FOXP2O15409 715 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 PSMD2Q13200 908 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 CEP112Q8N8E3 955 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 NKX2-3Q8TAU0 364 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 REEP2Q9BRK0 252 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 ICAM1P05362 532 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 LIN9Q5TKA1 542 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 SCYL2Q6P3W7 929 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 C15orf52Q6ZUT6 534 aaKnown RBP11.1□□□□□ -0.63
GABRB3-201ENST00000299267 HAUS6Q7Z4H7 955 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 CATSPER3Q86XQ3 398 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 VSTM4Q8IW00 320 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 RNF149Q8NC42 400 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 DYDC1Q8WWB3 177 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 PSPC1Q8WXF1 523 aaKnown RBP11.1□□□□□ -0.63
GABRB3-201ENST00000299267 RPS6KC1Q96S38 1066 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 JPH2Q9BR39 696 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-201ENST00000299267 MXRA8Q9BRK3 442 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 POLR3FQ9H1D9 316 aaPredicted RBP11.1□□□□□ -0.63
GABRB3-201ENST00000299267 PEX10O60683 326 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 H2AFZP0C0S5 128 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 PRPHP41219 470 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 PPP1R7Q15435 360 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 MAPK6Q16659 721 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 DNAJC21Q5F1R6 531 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 H2AFVQ71UI9 128 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 TAB3Q8N5C8 712 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 FAM107BQ9H098 131 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 RGPD5Q99666 1765 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 EHHADHQ08426 723 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 MCPH1Q8NEM0 835 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 P2RX7Q99572 595 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 TSPYL1Q9H0U9 437 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 PVALEFA0A1B0GWK0 134 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 ZNF233A6NK53 670 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 CXCR5P32302 372 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 LRRC63Q05C16 580 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 ELF2Q15723 593 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 DHX40Q8IX18 779 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 MRRFQ96E11 262 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 TSGA10Q9BZW7 698 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 INPP5FQ9Y2H2 1132 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 COL14A1Q05707 1796 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 RSPH10B2B2RC85 870 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 IRF6O14896 467 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 VPS41P49754 854 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 MB21D1Q8N884 522 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 GPRC5CQ9NQ84 441 aa11.09□□□□□ -0.63
GABRB3-201ENST00000299267 CGNQ9P2M7 1197 aaKnown RBP11.09□□□□□ -0.63
GABRB3-201ENST00000299267 KCNK3O14649 394 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 SFNP31947 248 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 ETF1P62495 437 aaKnown RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 VGLL4Q14135 290 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 HACE1Q8IYU2 909 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 ENGASEQ8NFI3 743 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 MED10Q9BTT4 135 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 GOLGA8SH3BPF8 625 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 EYA4O95677 639 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 EGFRP00533 1210 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 CTSHP09668 335 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 PDE6CP51160 858 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 CNTN2Q02246 1040 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 MESDQ14696 234 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 SEL1L2Q5TEA6 688 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 XXYLT1Q8NBI6 393 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 MTRQ99707 1265 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 MAK16Q9BXY0 300 aaKnown RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 THAP9Q9H5L6 903 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 ACTN4O43707 911 aaKnown RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 CETPP11597 493 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 PTK2Q05397 1052 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 TWF2Q6IBS0 349 aaKnown RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 EP400NLQ6ZTU2 488 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 PPP1R13LQ8WUF5 828 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 CCDC51Q96ER9 411 aa11.08□□□□□ -0.64
GABRB3-201ENST00000299267 FAM193BQ96PV7 902 aaPredicted RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 NUCKS1Q9H1E3 243 aaKnown RBP11.08□□□□□ -0.64
GABRB3-201ENST00000299267 MED24O75448 989 aa11.07□□□□□ -0.64
GABRB3-201ENST00000299267 MYBP10242 640 aa11.07□□□□□ -0.64
GABRB3-201ENST00000299267 ACOT2P49753 483 aa11.07□□□□□ -0.64
GABRB3-201ENST00000299267 DPYDQ12882 1025 aa11.07□□□□□ -0.64
GABRB3-201ENST00000299267 ZNF568Q3ZCX4 644 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms