RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 IGSF9BQ9UPX0 1349 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 DKC1O60832 514 aaKnown RBP eCLIP27.43■■□□□ 1.987e-71■■■■■ 267.5
GTF2A1-201ENST00000298173 YWHABP31946 246 aaKnown RBP27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 ADCYAP1R1P41586 468 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 GIT2Q14161 759 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 HSDL1Q3SXM5 330 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 IQSEC1Q6DN90 963 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 PCYT2Q99447 389 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 NAT10Q9H0A0 1025 aaKnown RBP27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 ANKEF1Q9NU02 776 aa27.43■■□□□ 1.98
GTF2A1-201ENST00000298173 FRMD3A2A2Y4 597 aa27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 ARHGAP1Q07960 439 aa27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 CT47A1Q5JQC4 288 aaPredicted RBP27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 EMID1Q96A84 441 aaPredicted RBP27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 RUSC1Q9BVN2 902 aa27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 KCND2Q9NZV8 630 aa27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 GABRQQ9UN88 632 aa27.42■■□□□ 1.98
GTF2A1-201ENST00000298173 NPHP3-ACAD11A0A0J9YXS1 232 aa27.41■■□□□ 1.98
GTF2A1-201ENST00000298173 RARRES1P49788 294 aa27.41■■□□□ 1.98
GTF2A1-201ENST00000298173 DUSP28Q4G0W2 176 aa27.41■■□□□ 1.98
GTF2A1-201ENST00000298173 ANO5Q75V66 913 aa27.41■■□□□ 1.98
GTF2A1-201ENST00000298173 AFAP1L1Q8TED9 768 aa27.41■■□□□ 1.98
GTF2A1-201ENST00000298173 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 PPP1R3GB7ZBB8 358 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 ZNF865P0CJ78 1059 aaPredicted RBP27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 CD44P16070 742 aaKnown RBP27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 ATP4AP20648 1035 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 LAMC2Q13753 1193 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 ZNF302Q9NR11 478 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 LGR5O75473 907 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 SMPD1P17405 629 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 CYP2C19P33261 490 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 TCF7P36402 384 aaPredicted RBP27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 FLT3LGP49771 235 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 CCDC144BQ3MJ40 725 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 PRAMEF19Q5SWL8 479 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 DHX40Q8IX18 779 aaKnown RBP27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 CCDC47Q96A33 483 aaKnown RBP27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 SPATA33Q96N06 139 aa27.4■■□□□ 1.98
GTF2A1-201ENST00000298173 BACH1O14867 736 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 GH1P01241 217 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 PTGS1P23219 599 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 KIF22Q14807 665 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 UVSSAQ2YD98 709 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 GJC2Q5T442 439 aaPredicted RBP27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 LUZP1Q86V48 1076 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 SMYD4Q8IYR2 804 aaPredicted RBP27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 REEP2Q9BRK0 252 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 GTPBP4Q9BZE4 634 aaKnown RBP27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 EXOC1Q9NV70 894 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 PANK4Q9NVE7 773 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 DACH1Q9UI36 760 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 ZHX1Q9UKY1 873 aaPredicted RBP27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 GDAQ9Y2T3 454 aa27.39■■□□□ 1.97
GTF2A1-201ENST00000298173 CASP8AP2Q9UKL3 1982 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 ARHGEF35A5YM69 484 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 GPR25O00155 361 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 NKRFO15226 690 aaKnown RBP eCLIP27.38■■□□□ 1.971e-7■■□□□ 12.2
GTF2A1-201ENST00000298173 IDEP14735 1019 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 STK4Q13043 487 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 PSMD2Q13200 908 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 SAGE1Q9NXZ1 904 aa27.38■■□□□ 1.97
GTF2A1-201ENST00000298173 TMEM150BA6NC51 233 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 GUCY2CP25092 1073 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 STAT5BP51692 787 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 PRKCZQ05513 592 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 COBLL1Q53SF7 1204 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 XKR3Q5GH77 459 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 UTP14CQ5TAP6 766 aaKnown RBP27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 PADI6Q6TGC4 694 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 OTUD6AQ7L8S5 288 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 CCDC65Q8IXS2 484 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 MED15Q96RN5 788 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 PCDHA2Q9Y5H9 948 aa27.37■■□□□ 1.97
GTF2A1-201ENST00000298173 NOP56O00567 594 aaKnown RBP27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 ADCY6O43306 1168 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 KRT18P05783 430 aaKnown RBP27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 ERCC5P28715 1186 aaPredicted RBP27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 PRKCEQ02156 737 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 CACNB1Q02641 598 aaPredicted RBP27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 RAD51AP2Q09MP3 1159 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 COASYQ13057 564 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 PCNTO95613 3336 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 PRCPP42785 496 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 NPEPPSP55786 919 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 NCAPHQ15003 741 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 L1TD1Q5T7N2 865 aaKnown RBP27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 FAM160B1Q5W0V3 765 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 PLPPR4Q7Z2D5 763 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 ADSSL1Q8N142 457 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 KIAA0895Q8NCT3 520 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 PPTC7Q8NI37 304 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 HPS3Q969F9 1004 aa27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 GNEQ9Y223 722 aaKnown RBP27.36■■□□□ 1.97
GTF2A1-201ENST00000298173 EMSYQ7Z589 1322 aa27.35■■□□□ 1.97
GTF2A1-201ENST00000298173 ARID2Q68CP9 1835 aa27.35■■□□□ 1.97
GTF2A1-201ENST00000298173 TNFAIP2Q03169 654 aa27.35■■□□□ 1.97
GTF2A1-201ENST00000298173 NIFKQ9BYG3 293 aaKnown RBP27.35■■□□□ 1.97
GTF2A1-201ENST00000298173 NRBP1Q9UHY1 535 aa27.35■■□□□ 1.97
GTF2A1-201ENST00000298173 IKBKBO14920 756 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms