RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 HS2ST1Q7LGA3 356 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC13Q8IYE1 715 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 ANKRD42Q8N9B4 389 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 NEDD1Q8NHV4 660 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 PBKQ96KB5 322 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 SH3GL2Q99962 352 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 CHORDC1Q9UHD1 332 aaPredicted RBP13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 ODF2LQ9ULJ1 636 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 FAM107AO95990 144 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 AKR1B1P15121 316 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 VPS41P49754 854 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 CUL1Q13616 776 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 MLXIPLQ9NP71 852 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 RASAL2Q9UJF2 1139 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 DAAM1Q9Y4D1 1078 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 HLA-DOAP06340 250 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 CLNS1AP54105 237 aaKnown RBP13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 MEI1Q5TIA1 1274 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 ZNF662Q6ZS27 426 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 OTUD6AQ7L8S5 288 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC105Q8IYK2 499 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 ADGRF4Q8IZF3 695 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 SYCE1Q8N0S2 351 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 IQCKQ8N0W5 287 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 PIGOQ8TEQ8 1089 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 PLCD4Q9BRC7 762 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 TACO1Q9BSH4 297 aaKnown RBP13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 DNAJC17Q9NVM6 304 aaKnown RBP13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
TMEM200A-201ENST00000296978 FGRP09769 529 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 UBXN2AP68543 259 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC38Q502W7 563 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 ZNF571Q7Z3V5 609 aaPredicted RBP13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 HOOK3Q86VS8 718 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 N4BP2L2Q92802 583 aaPredicted RBP13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 GGA1Q9UJY5 639 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 CHUKO15111 745 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 SPOPO43791 374 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 PDHBP11177 359 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 ITIH3Q06033 890 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 ELAC2Q9BQ52 826 aaKnown RBP13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 SWAP70Q9UH65 585 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 STK38LQ9Y2H1 464 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 GJC1P36383 396 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 SKOR1P84550 965 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 ECM1Q16610 540 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 HGSNATQ68CP4 663 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 GLG1Q92896 1179 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 EDEM3Q9BZQ6 932 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 INTS9Q9NV88 658 aaKnown RBP13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 MTRF1LQ9UGC7 380 aaKnown RBP13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 ZBTB21Q9ULJ3 1066 aa13.69□□□□□ -0.22
TMEM200A-201ENST00000296978 SLURP2P0DP57 97 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 HNRNPH3P31942 346 aaKnown RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 SEMA3FQ13275 785 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 MESDQ14696 234 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 TBC1D1Q86TI0 1168 aaPredicted RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 ISCUQ9H1K1 167 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 CXorf56Q9H5V9 222 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 PNMA6FA0A0J9YX94 578 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 PJA2O43164 708 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 EXOC3O60645 756 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 PDIA5Q14554 519 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 SLC30A10Q6XR72 485 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 MMEP08473 750 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 CASP4P49662 377 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 USP11P51784 963 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 CACNB3P54284 484 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 DR1Q01658 176 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 CCDC197Q8NCU1 140 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 RUBCNQ92622 972 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 MRRFQ96E11 262 aaKnown RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 SEC16BQ96JE7 1060 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 PSMD1Q99460 953 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 FRMD4BQ9Y2L6 1034 aa13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 BZW2Q9Y6E2 419 aaKnown RBP13.68□□□□□ -0.22
TMEM200A-201ENST00000296978 MYBP10242 640 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 FLT3P36888 993 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 GALCP54803 685 aa13.67□□□□□ -0.22
TMEM200A-201ENST00000296978 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms