RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NFIXQ14938 502 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 PRR16Q569H4 304 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 PARP9Q8IXQ6 854 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 DYDC1Q8WWB3 177 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 FMO2Q99518 471 aa16.03■□□□□ 0.16
CCNF-201ENST00000293968 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
CCNF-201ENST00000293968 UFL1O94874 794 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.16
CCNF-201ENST00000293968 CASP5P51878 434 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 BIRC3Q13489 604 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 ARHGAP44Q17R89 818 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 COBLL1Q53SF7 1204 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 TPCN2Q8NHX9 752 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 PSMD1Q99460 953 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 BCS1LQ9Y276 419 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 LEMD3Q9Y2U8 911 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 SNX24Q9Y343 169 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 BCORQ6W2J9 1755 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 TBCAO75347 108 aaKnown RBP16.02■□□□□ 0.16
CCNF-201ENST00000293968 SMTNP53814 917 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 MARCH10Q8NA82 808 aaPredicted RBP16.02■□□□□ 0.16
CCNF-201ENST00000293968 HVCN1Q96D96 273 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 CASZ1Q86V15 1759 aa16.02■□□□□ 0.16
CCNF-201ENST00000293968 USP17L10C9JJH3 530 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 HIBCHQ6NVY1 386 aaPredicted RBP16.02■□□□□ 0.15
CCNF-201ENST00000293968 GLYCTKQ8IVS8 523 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 ADGRF4Q8IZF3 695 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 MGARPQ8TDB4 240 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 TCP11Q8WWU5 503 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 OSGEPQ9NPF4 335 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 GGT7Q9UJ14 662 aa16.02■□□□□ 0.15
CCNF-201ENST00000293968 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 CLTAP09496 248 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 GBP2P32456 591 aaPredicted RBP16.01■□□□□ 0.15
CCNF-201ENST00000293968 SNAP25P60880 206 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
CCNF-201ENST00000293968 PLS1Q14651 629 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 FAM133BQ5BKY9 247 aaKnown RBP16.01■□□□□ 0.15
CCNF-201ENST00000293968 CYB5D1Q6P9G0 228 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 HAS1Q92839 578 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 GLG1Q92896 1179 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 AIPL1Q9NZN9 384 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 OPLAHO14841 1288 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 NEDD9Q14511 834 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 SPRED3Q2MJR0 410 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 TMEM119Q4V9L6 283 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
CCNF-201ENST00000293968 GANQ9H2C0 597 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 DOCK2Q92608 1830 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 COL4A1P02462 1669 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 DNM1LO00429 736 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 AKR1B1P15121 316 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 ZCWPW2Q504Y3 356 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 C16orf86Q6ZW13 317 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 ACTR5Q9H9F9 607 aaPredicted RBP16.01■□□□□ 0.15
CCNF-201ENST00000293968 MYBP10242 640 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 ANKS4BQ8N8V4 417 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
CCNF-201ENST00000293968 PLCH1Q4KWH8 1693 aa16■□□□□ 0.15
CCNF-201ENST00000293968 C6orf229H3BNL8 230 aa16■□□□□ 0.15
CCNF-201ENST00000293968 CYP11B2P19099 503 aa16■□□□□ 0.15
CCNF-201ENST00000293968 PON1P27169 355 aa16■□□□□ 0.15
CCNF-201ENST00000293968 ZNF76P36508 570 aa16■□□□□ 0.15
CCNF-201ENST00000293968 STAT1P42224 750 aa16■□□□□ 0.15
CCNF-201ENST00000293968 CASP4P49662 377 aa16■□□□□ 0.15
CCNF-201ENST00000293968 DENND2CQ68D51 928 aa16■□□□□ 0.15
CCNF-201ENST00000293968 KIRREL3Q8IZU9 778 aa16■□□□□ 0.15
CCNF-201ENST00000293968 SYCE1Q8N0S2 351 aa16■□□□□ 0.15
CCNF-201ENST00000293968 OSBPL7Q9BZF2 842 aa16■□□□□ 0.15
CCNF-201ENST00000293968 CACNA1SQ13698 1873 aa16■□□□□ 0.15
CCNF-201ENST00000293968 CAND2O75155 1236 aa16■□□□□ 0.15
CCNF-201ENST00000293968 MMEP08473 750 aa16■□□□□ 0.15
CCNF-201ENST00000293968 GALCP54803 685 aa16■□□□□ 0.15
CCNF-201ENST00000293968 DR1Q01658 176 aa16■□□□□ 0.15
CCNF-201ENST00000293968 LRRC4CQ9HCJ2 640 aa16■□□□□ 0.15
CCNF-201ENST00000293968 SWAP70Q9UH65 585 aa16■□□□□ 0.15
CCNF-201ENST00000293968 DNM3Q9UQ16 869 aa16■□□□□ 0.15
CCNF-201ENST00000293968 BZW2Q9Y6E2 419 aaKnown RBP16■□□□□ 0.15
CCNF-201ENST00000293968 LRP5O75197 1615 aa16■□□□□ 0.15
CCNF-201ENST00000293968 CCDC188H7C350 402 aa16■□□□□ 0.15
CCNF-201ENST00000293968 RGS16O15492 202 aaPredicted RBP16■□□□□ 0.15
CCNF-201ENST00000293968 CALUO43852 315 aaPredicted RBP16■□□□□ 0.15
CCNF-201ENST00000293968 SCTRP47872 440 aa16■□□□□ 0.15
CCNF-201ENST00000293968 ANKRD20A8PQ5CZ79 823 aa16■□□□□ 0.15
CCNF-201ENST00000293968 CCDC197Q8NCU1 140 aa16■□□□□ 0.15
CCNF-201ENST00000293968 TMOD4Q9NZQ9 345 aa16■□□□□ 0.15
CCNF-201ENST00000293968 DAAM1Q9Y4D1 1078 aa16■□□□□ 0.15
CCNF-201ENST00000293968 BUB1BO60566 1050 aaPredicted RBP15.99■□□□□ 0.15
CCNF-201ENST00000293968 LRRN2O75325 713 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 PSMC6P62333 389 aa15.99■□□□□ 0.15
CCNF-201ENST00000293968 IRF2BP2Q7Z5L9 587 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms