RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 RASSF4Q9H2L5 321 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 USP20Q9Y2K6 914 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 RGS16O15492 202 aaPredicted RBP5.2□□□□□ -1.58
UBR1-201ENST00000290650 DAPK3O43293 454 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 ORC4O43929 436 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 ABL1P00519 1130 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 FGGP02679 453 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 EZRP15311 586 aaKnown RBP5.2□□□□□ -1.58
UBR1-201ENST00000290650 SF3B3Q15393 1217 aaKnown RBP5.2□□□□□ -1.58
UBR1-201ENST00000290650 PKN1Q16512 942 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 ALKBH5Q6P6C2 394 aaKnown RBP5.2□□□□□ -1.58
UBR1-201ENST00000290650 TMEM179Q6ZVK1 233 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 CTAGE3PQ8IX95 158 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 C7orf31Q8N865 590 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 CCDC89Q8N998 374 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 FBF1Q8TES7 1133 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 BPIFA3Q9BQP9 254 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 FAM213AQ9BRX8 229 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 LXNQ9BS40 222 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 DDX47Q9H0S4 455 aaKnown RBP5.2□□□□□ -1.58
UBR1-201ENST00000290650 FAM217BQ9NTX9 383 aaPredicted RBP5.2□□□□□ -1.58
UBR1-201ENST00000290650 DNAJC12Q9UKB3 198 aa5.2□□□□□ -1.58
UBR1-201ENST00000290650 SERPING1P05155 500 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 NUMBP49757 651 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 YARSP54577 528 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 MTMR2Q13614 643 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 PDXDC2PQ6P474 469 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 RNF207Q6ZRF8 634 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 STK17AQ9UEE5 414 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CAPN7Q9Y6W3 813 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 TNS2Q63HR2 1409 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 NDUFB10O96000 172 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ZNF131P52739 623 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 HDLBPQ00341 1268 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 IFT88Q13099 833 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 GPR162Q16538 588 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CC2D1AQ6P1N0 951 aaPredicted RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 RPUSD2Q8IZ73 545 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 SYCE1Q8N0S2 351 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 NOA1Q8NC60 698 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 TTC7AQ9ULT0 858 aaPredicted RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 ZNF148Q9UQR1 794 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CD2APQ9Y5K6 639 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 MYH6P13533 1939 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 FGFR2P21802 821 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ZRSR2Q15696 482 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 SEZ6Q53EL9 994 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 SNRNP48Q6IEG0 339 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 SWSAP1Q6NVH7 229 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 GLYCTKQ8IVS8 523 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CYP2W1Q8TAV3 490 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 TBC1D31Q96DN5 1066 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CCDC97Q96F63 343 aaPredicted RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 CABS1Q96KC9 395 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 AGBL1Q96MI9 1066 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 NACC1Q96RE7 527 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 REEP2Q9BRK0 252 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ZWILCHQ9H900 591 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 JMJD4Q9H9V9 463 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 SH3GLB2Q9NR46 395 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ADD3Q9UEY8 706 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 FAM184BQ9ULE4 1060 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 MRFAP1Q9Y605 127 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 SGK1O00141 431 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ZBTB39O15060 712 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 TCP1P17987 556 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 SLC9A1P19634 815 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 MAPK4P31152 587 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 PDCLQ13371 301 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 DGKZQ13574 1117 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 SAMD7Q7Z3H4 446 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 THNSL1Q8IYQ7 743 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 SH2D3CQ8N5H7 860 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 GLIS3Q8NEA6 775 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 NEDD1Q8NHV4 660 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ACER1Q8TDN7 264 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CCDC77Q9BR77 488 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 LRRC1Q9BTT6 524 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 WDR19Q8NEZ3 1342 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 TMEM150BA6NC51 233 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 IPO5O00410 1097 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 CASP4P49662 377 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 KCNB2Q92953 911 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 OSBPL9Q96SU4 736 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 DHX36Q9H2U1 1008 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 CUEDC2Q9H467 287 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 TMEM191BP0C7N4 346 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 HMGCS2P54868 508 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 ZNF543Q08ER8 600 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 GNPTABQ3T906 1256 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CCDC38Q502W7 563 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CCDC93Q567U6 631 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 PADI6Q6TGC4 694 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CDR2LQ86X02 465 aaPredicted RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 PRPF38AQ8NAV1 312 aaKnown RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 NAP1L3Q99457 506 aaPredicted RBP5.19□□□□□ -1.58
UBR1-201ENST00000290650 PI4K2AQ9BTU6 479 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 NKIRAS1Q9NYS0 192 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 JRKLQ9Y4A0 524 aa5.19□□□□□ -1.58
UBR1-201ENST00000290650 CAMTA1Q9Y6Y1 1673 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms