RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CCDC50Q8IVM0 306 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 MGARPQ8TDB4 240 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 BCAS3Q9H6U6 928 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 MAP2K7O14733 419 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 FGGP02679 453 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 PLTPP55058 493 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 AMPD2Q01433 879 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 SCFD1Q8WVM8 642 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 IQCDQ96DY2 449 aa17.34■□□□□ 0.37
SMAD6-201ENST00000288840 UCHL3P15374 230 aa17.33■□□□□ 0.37
SMAD6-201ENST00000288840 MIER3Q7Z3K6 550 aa17.33■□□□□ 0.37
SMAD6-201ENST00000288840 EIF2AK1Q9BQI3 630 aaKnown RBP17.33■□□□□ 0.37
SMAD6-201ENST00000288840 UBE2TQ9NPD8 197 aaPredicted RBP17.33■□□□□ 0.37
SMAD6-201ENST00000288840 PPP1R7Q15435 360 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 CERS5Q8N5B7 392 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
SMAD6-201ENST00000288840 SALL4Q9UJQ4 1053 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 DNAJC12Q9UKB3 198 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 C21orf2O43822 256 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 ECM2O94769 699 aaPredicted RBP17.33■□□□□ 0.36
SMAD6-201ENST00000288840 GLI1P08151 1106 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 CCDC172P0C7W6 258 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 ECE1P42892 770 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 STAT2P52630 851 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 VPS72Q15906 364 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 SLC18A3Q16572 532 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 FAM102BQ5T8I3 360 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 CCDC105Q8IYK2 499 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 HAS1Q92839 578 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 PLAAQ9Y263 795 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 CAPN7Q9Y6W3 813 aa17.33■□□□□ 0.36
SMAD6-201ENST00000288840 GCLMP48507 274 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 DHX9Q08211 1270 aaKnown RBP17.32■□□□□ 0.36
SMAD6-201ENST00000288840 TRADDQ15628 312 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 PROM2Q8N271 834 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 CELF4Q9BZC1 486 aaKnown RBP17.32■□□□□ 0.36
SMAD6-201ENST00000288840 PARVGQ9HBI0 331 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 hCG_1984214I3L0E3 225 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 IFT88Q13099 833 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 CREG2Q8IUH2 290 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 ZNF713Q8N859 430 aaPredicted RBP17.32■□□□□ 0.36
SMAD6-201ENST00000288840 TMOD4Q9NZQ9 345 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
SMAD6-201ENST00000288840 AFF2P51816 1311 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 GOLGA8KD6RF30 607 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 SHMT1P34896 483 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 PSMC2P35998 433 aaKnown RBP17.32■□□□□ 0.36
SMAD6-201ENST00000288840 IFNAR2P48551 515 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 NLGN1Q8N2Q7 840 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 CCDC114Q96M63 670 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 FBXO28Q9NVF7 368 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 USTQ9Y2C2 406 aa17.32■□□□□ 0.36
SMAD6-201ENST00000288840 PGRMC1O00264 195 aaKnown RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 DAPK3O43293 454 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 PPP1R11O60927 126 aaPredicted RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 FAM153BP0C7A2 387 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 PDE6BP35913 854 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 FAM153CQ494X1 144 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 ZIM3Q96PE6 472 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 FAM153AQ9UHL3 310 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 RAD51CO43502 376 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 EIF2AK2P19525 551 aaKnown RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 BIRC3Q13489 604 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 SNX1Q13596 522 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 DRAP1Q14919 205 aaPredicted RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 MEA1Q16626 185 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 LRRC31Q6UY01 552 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 RUSC1Q9BVN2 902 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 METTL14Q9HCE5 456 aaKnown RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 KCNK9Q9NPC2 374 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 NOVA2Q9UNW9 492 aaKnown RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 ABCB11O95342 1321 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 ECE2O60344 883 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 PPFIA4O75335 1185 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 VIMP08670 466 aaKnown RBP17.31■□□□□ 0.36
SMAD6-201ENST00000288840 MYL7Q01449 175 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 WDR93Q6P2C0 686 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 SRLQ86TD4 932 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 TCHPQ9BT92 498 aa17.31■□□□□ 0.36
SMAD6-201ENST00000288840 ALS2Q96Q42 1657 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 SEC24CP53992 1094 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 DDR1Q08345 913 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 KCNMA1Q12791 1236 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 LRRC45Q96CN5 670 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 CEP63Q96MT8 703 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 AKAP3O75969 853 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 CEP57Q86XR8 500 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 ANKS1AQ92625 1134 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 SNX24Q9Y343 169 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
SMAD6-201ENST00000288840 NR1D1P20393 614 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms