RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 JAKMIP1Q96N16 626 aaKnown RBP15.97■□□□□ 0.15
TPM1-202ENST00000288398 PCYT2Q99447 389 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 LMAN2LQ9H0V9 348 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 GINS2Q9Y248 185 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 COL4A6Q14031 1691 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 XIRP2A4UGR9 3374 aa15.97■□□□□ 0.15
TPM1-202ENST00000288398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.96■□□□□ 0.15
TPM1-202ENST00000288398 SMIM35A0A1B0GVV1 85 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 HBP1O60381 514 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 GNA11P29992 359 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 BMPR1AP36894 532 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 SETQ01105 290 aaPredicted RBP15.96■□□□□ 0.15
TPM1-202ENST00000288398 APOBRQ0VD83 1088 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 FUT2Q10981 343 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 ITGB3BPQ13352 177 aaPredicted RBP15.96■□□□□ 0.15
TPM1-202ENST00000288398 PFKFB3Q16875 520 aaPredicted RBP15.96■□□□□ 0.15
TPM1-202ENST00000288398 TCEAL5Q5H9L2 206 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 PDXDC2PQ6P474 469 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 MTHFD1LQ6UB35 978 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 Q6ZUG5 572 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 SKAP1Q86WV1 359 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 NPAS4Q8IUM7 802 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 REXO1Q8N1G1 1221 aaKnown RBP15.96■□□□□ 0.15
TPM1-202ENST00000288398 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 TRAPPC12Q8WVT3 735 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 BRF1Q92994 677 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 ZNF577Q9BSK1 485 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 CELF4Q9BZC1 486 aaKnown RBP15.96■□□□□ 0.15
TPM1-202ENST00000288398 ZNF302Q9NR11 478 aa15.96■□□□□ 0.15
TPM1-202ENST00000288398 IPO5O00410 1097 aaKnown RBP15.95■□□□□ 0.14
TPM1-202ENST00000288398 PSMA5P28066 241 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 CDC27P30260 824 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 NFX1Q12986 1120 aaKnown RBP15.95■□□□□ 0.14
TPM1-202ENST00000288398 TMEM31Q5JXX7 168 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 CCDC148Q8NFR7 591 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 ATP8B4Q8TF62 1192 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 ZBTB10Q96DT7 871 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 PABPC5Q96DU9 382 aaKnown RBP15.95■□□□□ 0.14
TPM1-202ENST00000288398 TBC1D22BQ9NU19 505 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 CLDND1Q9NY35 253 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 PADI3Q9ULW8 664 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 HCN4Q9Y3Q4 1203 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 SAMM50Q9Y512 469 aa15.95■□□□□ 0.14
TPM1-202ENST00000288398 MUC3AQ02505 3323 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 ESYT2A0FGR8 921 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 DENND3A2RUS2 1198 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 C5orf67F2Z3F1 127 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 H3BQ06 376 aaPredicted RBP15.94■□□□□ 0.14
TPM1-202ENST00000288398 REC8O95072 547 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 CSPG5O95196 566 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 KLRC1P26715 233 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 ADD1P35611 737 aaKnown RBP15.94■□□□□ 0.14
TPM1-202ENST00000288398 CLK2P49760 499 aaKnown RBP15.94■□□□□ 0.14
TPM1-202ENST00000288398 ZNF484Q5JVG2 852 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
TPM1-202ENST00000288398 CMTR2Q8IYT2 770 aaKnown RBP15.94■□□□□ 0.14
TPM1-202ENST00000288398 GJD3Q8N144 294 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 PLVAPQ9BX97 442 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 AGO3Q9H9G7 860 aaKnown RBP15.94■□□□□ 0.14
TPM1-202ENST00000288398 COL1A2P08123 1366 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 IGSF9BQ9UPX0 1349 aa15.94■□□□□ 0.14
TPM1-202ENST00000288398 RALGAPA2Q2PPJ7 1873 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 RPS6KA5O75582 802 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 DGKIO75912 1065 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 ATG7O95352 703 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 PSAPP07602 524 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 PAN2Q504Q3 1202 aaKnown RBP15.93■□□□□ 0.14
TPM1-202ENST00000288398 SPOUT1Q5T280 376 aaKnown RBP15.93■□□□□ 0.14
TPM1-202ENST00000288398 SWSAP1Q6NVH7 229 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 ABHD15Q6UXT9 468 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.93■□□□□ 0.14
TPM1-202ENST00000288398 CLP1Q92989 425 aaKnown RBP15.93■□□□□ 0.14
TPM1-202ENST00000288398 ZMYND12Q9H0C1 365 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 EPHX3Q9H6B9 360 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 PCDHB7Q9Y5E2 793 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
TPM1-202ENST00000288398 GRXCR2A6NFK2 248 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 FAM86B1E9PN63 330 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 GPR182O15218 404 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 CCNE2O96020 404 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 CYP3A4P08684 503 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 FAM86B2P0C5J1 330 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 CPA1P15085 419 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 IL9P15248 144 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 PRR16Q569H4 304 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 ZNF746Q6NUN9 644 aaPredicted RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 TRMT1LQ7Z2T5 733 aaKnown RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 CCDC60Q8IWA6 550 aaPredicted RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 FAM178BQ8IXR5 827 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 SMAP1Q8IYB5 467 aaPredicted RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 TRIM22Q8IYM9 498 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 METTL13Q8N6R0 699 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 NEK9Q8TD19 979 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 ZNF689Q96CS4 500 aaPredicted RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 FAM122AQ96E09 287 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 UIMC1Q96RL1 719 aa15.92■□□□□ 0.14
TPM1-202ENST00000288398 SLC26A6Q9BXS9 759 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms