RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TEX13BQ9BXU2 312 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 MMRN2Q9H8L6 949 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 L2HGDHQ9H9P8 463 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 PARVGQ9HBI0 331 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 TYW1Q9NV66 732 aaKnown RBP10.58□□□□□ -0.72
TRIM55-201ENST00000276573 ZNHIT6Q9NWK9 470 aaKnown RBP10.58□□□□□ -0.72
TRIM55-201ENST00000276573 DBR1Q9UK59 544 aaKnown RBP10.58□□□□□ -0.72
TRIM55-201ENST00000276573 ODF2LQ9ULJ1 636 aa10.58□□□□□ -0.72
TRIM55-201ENST00000276573 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
TRIM55-201ENST00000276573 A0A0U1RQJ8 604 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 ADM5C9JUS6 153 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 EIF3DO15371 548 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 MAFGO15525 162 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 NDUFA10O95299 355 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 YBX3P16989 372 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 NR2F2P24468 414 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 NMT1P30419 496 aaKnown RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 QARSP47897 775 aaKnown RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 C9orf131Q5VYM1 1079 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 ZNF720Q7Z2F6 126 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 FRMD5Q7Z6J6 570 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 NSUN6Q8TEA1 469 aaKnown RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 ATRIPQ8WXE1 791 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 FIZ1Q96SL8 496 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 EDEM3Q9BZQ6 932 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 FAM184BQ9ULE4 1060 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 SAMM50Q9Y512 469 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 TESPA1A2RU30 521 aaPredicted RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 FANCGO15287 622 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 TGFB1I1O43294 461 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 RPL13P26373 211 aaKnown RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 CASQ1P31415 396 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 HNRNPH3P31942 346 aaKnown RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 CDK17Q00537 523 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 KCNA1Q09470 495 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 NLRX1Q86UT6 975 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 CCDC155Q8N6L0 562 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
TRIM55-201ENST00000276573 GPRASP2Q96D09 838 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 WDR24Q96S15 920 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 ACAD9Q9H845 621 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 LZTFL1Q9NQ48 299 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 CYP39A1Q9NYL5 469 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 CSADQ9Y600 493 aa10.57□□□□□ -0.72
TRIM55-201ENST00000276573 SRCAPQ6ZRS2 3230 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 COL11A1P12107 1806 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 EPHB6O15197 1021 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 CCNE2O96020 404 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 SFNP31947 248 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 JAK3P52333 1124 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 RBM10P98175 930 aaKnown RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 KRT76Q01546 638 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 MAPK7Q13164 816 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 PLS1Q14651 629 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 NFIL3Q16649 462 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 ZC2HC1CQ53FD0 456 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 C4orf19Q8IY42 314 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 CCDC170Q8IYT3 715 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 NEK11Q8NG66 645 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 INPP4AQ96PE3 977 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 SENP7Q9BQF6 1050 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 NHEJ1Q9H9Q4 299 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 A1CFQ9NQ94 594 aaKnown RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 PLAGL2Q9UPG8 496 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 REXO2Q9Y3B8 237 aaKnown RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 ASTN1O14525 1302 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 WDR64B1ANS9 1081 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 HIP1RO75146 1068 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 URI1O94763 535 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 NR3C1P04150 777 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 ARHGAP25P42331 645 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 IREB2P48200 963 aaKnown RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 RARRES1P49788 294 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 PSMC5P62195 406 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 KCNH2Q12809 1159 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 ODR4Q5SWX8 454 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 LBX2Q6XYB7 198 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 STXBP4Q6ZWJ1 553 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 DAW1Q8N136 415 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 CHST13Q8NET6 341 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 RDM1Q8NG50 284 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 STRA6Q9BX79 667 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 IRX2Q9BZI1 471 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 ARMCX3Q9UH62 379 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 ZNF215Q9UL58 517 aaPredicted RBP10.56□□□□□ -0.72
TRIM55-201ENST00000276573 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
TRIM55-201ENST00000276573 CLIC2O15247 247 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 KIF5CO60282 957 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 STAM2O75886 525 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms