RNA–Protein interactions for RNA: ENST00000276410.6

CHRNA6-201, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA6, Length 2,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-201ENST00000276410 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 DCAF17Q5H9S7 520 aaPredicted RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 USP17L6PQ6QN14 398 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 ADAT2Q7Z6V5 191 aaKnown RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 SLF2Q8IX21 1173 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 LRRC57Q8N9N7 239 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 UBLCP1Q8WVY7 318 aaPredicted RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 SYN2Q92777 582 aaPredicted RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 CYFIP2Q96F07 1278 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 DPH5Q9H2P9 285 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 HDAC9Q9UKV0 1011 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 NR2E1Q9Y466 385 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 TTI1O43156 1089 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 MED24O75448 989 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 BBOX1O75936 387 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 FSBPO95073 299 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 ZBTB48P10074 688 aaPredicted RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 ADRA2BP18089 450 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 CYP11B2P19099 503 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 NR2F2P24468 414 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 CTNNA1P35221 906 aaKnown RBP10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 USP11P51784 963 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 NFIAQ12857 509 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 PSMD2Q13200 908 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 PDIA5Q14554 519 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 ARSHQ5FYA8 562 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 CCDC13Q8IYE1 715 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 ADGRF4Q8IZF3 695 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 TRIM51Q9BSJ1 452 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 RAB34Q9BZG1 259 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 ISCUQ9H1K1 167 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 PLCB1Q9NQ66 1216 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 EMILIN3Q9NT22 766 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 RNF14Q9UBS8 474 aa10.87□□□□□ -0.67
CHRNA6-201ENST00000276410 HMGB1P1B2RPK0 211 aaPredicted RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 GCOM1H8Y6P7 765 aaPredicted RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 MYZAPP0CAP1 466 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 UCHL3P15374 230 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 HOXD13P35453 343 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 CASP4P49662 377 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 NT5C2P49902 561 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 KCNA1Q09470 495 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 TCP10Q12799 353 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 UBAP2Q5T6F2 1119 aaKnown RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 SCFD2Q8WU76 684 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 JPH2Q9BR39 696 aaPredicted RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 SLC12A6Q9UHW9 1150 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 SERPINB13Q9UIV8 391 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 NAGPAQ9UK23 515 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 PCDHA12Q9UN75 941 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 RSPH10B2B2RC85 870 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 FAM107AO95990 144 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 KRT18P05783 430 aaKnown RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 RSPH10BP0C881 870 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 MDM1Q8TC05 714 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 FAM163AQ96GL9 167 aaPredicted RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 CEP63Q96MT8 703 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 LUC7LQ9NQ29 371 aaKnown RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 KCNQ5Q9NR82 932 aa10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 DDX20Q9UHI6 824 aaKnown RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 NOVA2Q9UNW9 492 aaKnown RBP10.86□□□□□ -0.67
CHRNA6-201ENST00000276410 IGSF9BQ9UPX0 1349 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 G3V3G9 751 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 KRIT1O00522 736 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 TTLL1O95922 423 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 PON1P27169 355 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 POLD1P28340 1107 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 SNAP25P60880 206 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 GABPAQ06546 454 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 ACTN3Q08043 901 aaPredicted RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 PABPC4Q13310 644 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 SWT1Q5T5J6 900 aaKnown RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 TCERG1LQ5VWI1 586 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 ALKBH5Q6P6C2 394 aaKnown RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 SFR1Q86XK3 245 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 ZFPM1Q8IX07 1006 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 TPCN2Q8NHX9 752 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 CABS1Q96KC9 395 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 NCAPGQ9BPX3 1015 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 ZC3H12CQ9C0D7 883 aaKnown RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 NUCKS1Q9H1E3 243 aaKnown RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 DBNDD1Q9H9R9 158 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 OSGEPQ9NPF4 335 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 FOCADQ5VW36 1801 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 GOLGA6L10A6NI86 522 aa10.85□□□□□ -0.67
CHRNA6-201ENST00000276410 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms