RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 UTP4Q969X6 686 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 FGD4Q96M96 766 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 SELENOSQ9BQE4 189 aa17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-201ENST00000273062 ZNF831Q5JPB2 1677 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 USO1O60763 962 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 GM2AP17900 193 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 PRCPP42785 496 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 RPS8P62241 208 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 ATP11AP98196 1134 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 GALNTL6Q49A17 601 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 PRMT1Q99873 361 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 RIOK1Q9BRS2 568 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 UBAC1Q9BSL1 405 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 NACAP1Q9BZK3 213 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 ADAM7Q9H2U9 754 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 SAMD15Q9P1V8 674 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 SPATA31D3P0C874 917 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 SEPT2Q15019 361 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 SPATA31D4Q6ZUB0 917 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 RETREG2Q8NC44 543 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 ZNF510Q9Y2H8 683 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 SLC12A7Q9Y666 1083 aa17.12■□□□□ 0.33
CTDSP1-201ENST00000273062 A0A1W2PQC6 194 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 COPS2P61201 443 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 KLC1Q07866 573 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 SDCCAG8Q86SQ7 713 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 CCNJLQ8IV13 435 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 PRDM16Q9HAZ2 1276 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 CHD4Q14839 1912 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 PRDM1O75626 825 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 MMP1P03956 469 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 KIF11P52732 1056 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 LACTBP83111 547 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 ISCUQ9H1K1 167 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
CTDSP1-201ENST00000273062 EPHB6O15197 1021 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 HIP1RO75146 1068 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 MYBP10242 640 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 GNAT2P19087 354 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 TM4SF1P30408 202 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 BNIP1Q12981 228 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 ASRGL1Q7L266 308 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 C2CD5Q86YS7 1000 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 TLCD1Q96CP7 247 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 CCDC97Q96F63 343 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 PCMTD1Q96MG8 357 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 RHBDL2Q9NX52 303 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 EIF4A3P38919 411 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 CCDC38Q502W7 563 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 ZC2HC1CQ53FD0 456 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
CTDSP1-201ENST00000273062 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 H0Y3Z8 333 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 PRDX5P30044 214 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 BPIFB4P59827 614 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 ECM29Q5VYK3 1845 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 PBKQ96KB5 322 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 GPR101Q96P66 508 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 KRT23Q9C075 422 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 ABLIM1O14639 778 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 PEX11AO75192 247 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 SRGNP10124 158 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 PEX5P50542 639 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 INPP4AQ96PE3 977 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
CTDSP1-201ENST00000273062 SMIM23A6NLE4 172 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 PDLIM1O00151 329 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 SNX3O60493 162 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 LIFRP42702 1097 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 MECOMQ03112 1051 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 ENOX2Q16206 610 aaKnown RBP17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 FITM2Q8N6M3 262 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 FAM136AQ96C01 138 aa17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.33
CTDSP1-201ENST00000273062 PPP1R12CQ9BZL4 782 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms