RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
TPM3-201ENST00000271850 GRIK4Q16099 956 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 WWC2Q6AWC2 1192 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 XRRA1Q6P2D8 792 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 FAM178BQ8IXR5 827 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 TMEM192Q8IY95 271 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 CCDC82Q8N4S0 544 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 CTCFLQ8NI51 663 aaPredicted RBP10.29□□□□□ -0.76
TPM3-201ENST00000271850 ZNF689Q96CS4 500 aaPredicted RBP10.29□□□□□ -0.76
TPM3-201ENST00000271850 TCEANC2Q96MN5 208 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 YME1L1Q96TA2 773 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 ESYT1Q9BSJ8 1104 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
TPM3-201ENST00000271850 PCDHA6Q9UN73 950 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 PCDHA8Q9Y5H6 950 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 NRCAMQ92823 1304 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 GRXCR2A6NFK2 248 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 C5orf67F2Z3F1 127 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 PI4K2BG5E9Z4 385 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 ENPP3O14638 875 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 GRM6O15303 877 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 MCM5P33992 734 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 GTF2F1P35269 517 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM3-201ENST00000271850 DLX2Q07687 328 aaPredicted RBP10.28□□□□□ -0.76
TPM3-201ENST00000271850 TRAF1Q13077 416 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 PPFIA1Q13136 1202 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 ITGB3BPQ13352 177 aaPredicted RBP10.28□□□□□ -0.76
TPM3-201ENST00000271850 GPM6BQ13491 265 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 SGMS1Q86VZ5 419 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 TRAPPC12Q8WVT3 735 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 DNAJB3Q8WWF6 145 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 SEPT1Q8WYJ6 367 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 CLP1Q92989 425 aaKnown RBP10.28□□□□□ -0.76
TPM3-201ENST00000271850 TMEM87BQ96K49 555 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 C1QTNF1Q9BXJ1 281 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 JADE2Q9NQC1 790 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 ZNF215Q9UL58 517 aaPredicted RBP10.28□□□□□ -0.76
TPM3-201ENST00000271850 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 MUC6Q6W4X9 2439 aa10.28□□□□□ -0.76
TPM3-201ENST00000271850 GPR37L1O60883 481 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 ARP10275 920 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 DNAJB1P25685 340 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 KIF5BP33176 963 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 EXOSC10Q01780 885 aaKnown RBP10.27□□□□□ -0.77
TPM3-201ENST00000271850 MTMR1Q13613 665 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 CTC1Q2NKJ3 1217 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 ADCK5Q3MIX3 580 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
TPM3-201ENST00000271850 TAF2Q6P1X5 1199 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 CASC1Q6TDU7 716 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 NLRX1Q86UT6 975 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 MICU3Q86XE3 530 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 FANCBQ8NB91 859 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 BANK1Q8NDB2 785 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 APBB2Q92870 758 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 CUL5Q93034 780 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 LZTS2Q9BRK4 669 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 TMX1Q9H3N1 280 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 TMEM260Q9NX78 707 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 SEC63Q9UGP8 760 aaKnown RBP10.27□□□□□ -0.77
TPM3-201ENST00000271850 TUBE1Q9UJT0 475 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 KAT6AQ92794 2004 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 LOXHD1Q8IVV2 1947 aa10.27□□□□□ -0.77
TPM3-201ENST00000271850 CCDC69A6NI79 296 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 TBX10O75333 385 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 DGKIO75912 1065 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 CCNE2O96020 404 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 GNAT1P11488 350 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 INSRRP14616 1297 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 CDC27P30260 824 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 CD52P31358 61 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 CLK2P49760 499 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 GNAQP50148 359 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 GATMP50440 423 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 IGBP1P78318 339 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 TMEM62Q0P6H9 643 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 HYAL1Q12794 435 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 PLCB4Q15147 1175 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 TIGD5Q53EQ6 642 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 TMEM31Q5JXX7 168 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 APOA5Q6Q788 366 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 HEATR3Q7Z4Q2 680 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 GJD3Q8N144 294 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 PABPC5Q96DU9 382 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 IL17RAQ96F46 866 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 ZFRQ96KR1 1074 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 SAMD11Q96NU1 681 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 MXRA8Q9BRK3 442 aa10.26□□□□□ -0.77
TPM3-201ENST00000271850 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 NSUN3Q9H649 340 aaKnown RBP10.26□□□□□ -0.77
TPM3-201ENST00000271850 JPH1Q9HDC5 661 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms