RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 EIF3BP55884 814 aaKnown RBP18.73■□□□□ 0.59
LRRC56-201ENST00000270115 PTK2Q05397 1052 aa18.73■□□□□ 0.59
LRRC56-201ENST00000270115 CNKSR1Q969H4 720 aa18.73■□□□□ 0.59
LRRC56-201ENST00000270115 EDEM3Q9BZQ6 932 aa18.73■□□□□ 0.59
LRRC56-201ENST00000270115 ZMYND12Q9H0C1 365 aa18.73■□□□□ 0.59
LRRC56-201ENST00000270115 MAGEF1Q9HAY2 307 aa18.73■□□□□ 0.59
LRRC56-201ENST00000270115 MPHOSPH10O00566 681 aaKnown RBP18.72■□□□□ 0.59
LRRC56-201ENST00000270115 PRPF4BQ13523 1007 aaKnown RBP18.72■□□□□ 0.59
LRRC56-201ENST00000270115 FAM114A2Q9NRY5 505 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 ADAM22Q9P0K1 906 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 CCDC188H7C350 402 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 PPFIA2O75334 1257 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 PLTPP55058 493 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 TMED8Q6PL24 325 aaPredicted RBP18.72■□□□□ 0.59
LRRC56-201ENST00000270115 ATP8B4Q8TF62 1192 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 RNF25Q96BH1 459 aaPredicted RBP18.72■□□□□ 0.59
LRRC56-201ENST00000270115 MMTAG2Q9BU76 263 aaKnown RBP18.72■□□□□ 0.59
LRRC56-201ENST00000270115 NUCKS1Q9H1E3 243 aaKnown RBP18.72■□□□□ 0.59
LRRC56-201ENST00000270115 EPB41L4BQ9H329 900 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 ZFATQ9P243 1243 aa18.72■□□□□ 0.59
LRRC56-201ENST00000270115 CES2O00748 559 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 SNX3O60493 162 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 ATP4AP20648 1035 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 MSH2P43246 934 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 CTCFP49711 727 aaPredicted RBP18.71■□□□□ 0.59
LRRC56-201ENST00000270115 PMS2P54278 862 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 SLC29A2Q14542 456 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 DENND2CQ68D51 928 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 LRRC57Q8N9N7 239 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 SLC17A8Q8NDX2 589 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 SYN2Q92777 582 aaPredicted RBP18.71■□□□□ 0.59
LRRC56-201ENST00000270115 CALML4Q96GE6 196 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 MLXIPLQ9NP71 852 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 FGFR1OP2Q9NVK5 253 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 TBC1D7Q9P0N9 293 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 FGGP02679 453 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 ACTN1P12814 892 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 TXKP42681 527 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 COPS2P61201 443 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 ZNF571Q7Z3V5 609 aaPredicted RBP18.71■□□□□ 0.59
LRRC56-201ENST00000270115 GUF1Q8N442 669 aaKnown RBP18.71■□□□□ 0.59
LRRC56-201ENST00000270115 DYDC1Q8WWB3 177 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 GLG1Q92896 1179 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 TSG101Q99816 390 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 NSRP1Q9H0G5 558 aaKnown RBP18.71■□□□□ 0.59
LRRC56-201ENST00000270115 DBR1Q9UK59 544 aaKnown RBP18.71■□□□□ 0.59
LRRC56-201ENST00000270115 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
LRRC56-201ENST00000270115 DPPA5A6NC42 116 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 M0R2N6 131 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 LRRC63Q05C16 580 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 IFI16Q16666 785 aaKnown RBP18.7■□□□□ 0.58
LRRC56-201ENST00000270115 EPS8L3Q8TE67 593 aaKnown RBP18.7■□□□□ 0.58
LRRC56-201ENST00000270115 SLITRK6Q9H5Y7 841 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 BAZ2AQ9UIF9 1905 aaKnown RBP18.7■□□□□ 0.58
LRRC56-201ENST00000270115 A6NHS1 94 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 RAB27AP51159 221 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 ATP11AP98196 1134 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 SLC30A9Q6PML9 568 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 GIGYF2Q6Y7W6 1299 aaKnown RBP18.7■□□□□ 0.58
LRRC56-201ENST00000270115 UNC13DQ70J99 1090 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 TPCN2Q8NHX9 752 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 NEK9Q8TD19 979 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 NAF1Q96HR8 494 aaKnown RBP18.7■□□□□ 0.58
LRRC56-201ENST00000270115 SLC4A9Q96Q91 983 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 SNX24Q9Y343 169 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 KCPQ6ZWJ8 1503 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 SMIM24O75264 130 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 PDHA1P08559 390 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 NELFCDQ8IXH7 590 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 AK8Q96MA6 479 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 PLCD4Q9BRC7 762 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 BLOC1S4Q9NUP1 217 aa18.7■□□□□ 0.58
LRRC56-201ENST00000270115 USP15Q9Y4E8 981 aaPredicted RBP18.7■□□□□ 0.58
LRRC56-201ENST00000270115 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 TSPY2A6NKD2 308 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 CCDC169A6NNP5 214 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 TCP11X1B4DZS4 312 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 PDE8AO60658 829 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 CYP2D6P10635 497 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 KIF5BP33176 963 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 LACTBP83111 547 aaPredicted RBP18.69■□□□□ 0.58
LRRC56-201ENST00000270115 TXLNGYQ9BZA5 131 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 PABPC3Q9H361 631 aaKnown RBP18.69■□□□□ 0.58
LRRC56-201ENST00000270115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.69■□□□□ 0.58
LRRC56-201ENST00000270115 ABCB11O95342 1321 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 ZBTB48P10074 688 aaPredicted RBP18.69■□□□□ 0.58
LRRC56-201ENST00000270115 GNAT1P11488 350 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 NEFHP12036 1026 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 PRPHP41219 470 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 EPS15P42566 896 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 ALKBH5Q6P6C2 394 aaKnown RBP18.69■□□□□ 0.58
LRRC56-201ENST00000270115 OTUD6AQ7L8S5 288 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 TSC22D3Q99576 134 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 RIOK1Q9BRS2 568 aaKnown RBP18.69■□□□□ 0.58
LRRC56-201ENST00000270115 RAB17Q9H0T7 212 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
LRRC56-201ENST00000270115 MAP3K13O43283 966 aa18.68■□□□□ 0.58
LRRC56-201ENST00000270115 GRB10Q13322 594 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms